Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4316g00057 ATGACGATTGGCAGTCTTGCACCTAAGGCAGAGAGGAAGAAATCACGAAAGAACAAGGGAATTGTTAATGAGAATGCACCCTTGTTGCCTAAAAGTCAGGAGAGTGATGTTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTGGCCACCACAATTATTGGTGCTGGTATCATGGCCTTGCCTGCAACCTTGAAAGAGTTGGGGATGGTGCCTGGCCTTGCCGCAATCCTCTTCATGGCTTTGTTGACAGAGAAGTCAATTGAGCTTTTGATTAGGTTTACCCGTGCAGGGAAATCTGTTTCTTATGCTGGTCTCATGGGAGATTCCTTTGGGAAATATGGAAAAGCTCTTGTGCAGATATGTGTTATAATCAATAACATTGGCGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCATCTGCAATTGGAGATCATCATTCTGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACGGGGAGGACATTTATTGTCCTATTTACAACACTTGCTATATTTACACCCCTGGCAAGCTTTAAGCGAATTGATTCATTGAGATTCACATCTGCCCTTTCAGTTGCACTAGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATCTCAATTGTCAAGATTATAAGTGGAGGCATTGATATGCCCCGACTCTTCCCGGTCGCTACTGATGTGACATCAATCTTTAAACTGTTCACTGTAGTTCCTGTGTTTGTGACTGCCTATATCTGCCACTACAACGTTCACACCATAGATAATGAACTTGAGGACTCCTCACAGATGCAAGGGGTTGTACGCACCGCACTTGGTCTATGCTCTTCAGTGTACTTAATGATAAGCTTCTTTGGTTTCCTCCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGATACCAATCTTGGAATTCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGTTTAAGCTATGCTGCACACCTCATGCTTGTATTCCCAGTTGTCTTCTATCCATTGCGACTCAATATAGATGGTCTCTTCTTCTCTAAATCAAAGCCTTTGGTTCTGGATAACTTCAGATTTGCATCACTCACTATCGCTCTTATTGGTGTTATCTTCCTGGGAGCGAATTTCATACCTAGCATTTGGGATGCTTTCCAGTTCACTGGAGCAACCGCTGCAGTCTGTATAGGATTCATATTTCCTGCTGCCATCACTCTTAGGGACCGCTACAACATAGCAACTAAAGCAGATAAGATTCTGTCTGTCATTATGATAGTCCTGGCAGTCTTCTCAAACATTGTGGCTATATACAGTGATGCCTATGCCTTGATCAAGCAGAATAAAAGTTCACGTGAATGA 1398 0.4256 MTIGSLAPKAERKKSRKNKGIVNENAPLLPKSQESDVGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKELGMVPGLAAILFMALLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALVQICVIINNIGVLIVYMIIIGDVLSGTSSSAIGDHHSGILEGWFGVHWWTGRTFIVLFTTLAIFTPLASFKRIDSLRFTSALSVALAVVFLVIAVGISIVKIISGGIDMPRLFPVATDVTSIFKLFTVVPVFVTAYICHYNVHTIDNELEDSSQMQGVVRTALGLCSSVYLMISFFGFLLFGEGTLDDVLANFDTNLGIPFGSVLNDAVRLSYAAHLMLVFPVVFYPLRLNIDGLFFSKSKPLVLDNFRFASLTIALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKADKILSVIMIVLAVFSNIVAIYSDAYALIKQNKSSRE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4316g00057 465 PANTHER AMINO ACID TRANSPORTER 43 444 - -
Gabi4316g00057 465 MobiDBLite consensus disorder prediction 1 25 - -
Gabi4316g00057 465 Pfam Transmembrane amino acid transporter protein 45 451 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4316g00057 Gabi-Chr4316 562611 566410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4316g00057 3 465 Amino Acid or Auxin Permease AAAP Family AT3G30390 67.819 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4316g00057 K14207 - gmx:100796345 803.127