Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4316g00014 | ATGAAGGGTTCTCTAACAGCAGAGAAAGGGTGGACGAAAGGCCCTTGGACTCATGAAGAGGACAAGTTGCTCCGTGAACATGTAAGCTTACATGGGGAGAGTAGATGGAATTCAGTGTCCAAGTTTACAGGCTTAAATAGGAGTGGCAAAAGTTGCAGGTTGAGATGGGTAAATTATTTGAGGCCAGGCCTCAAGAAAGGCCAATTAACACCACTGGAAGAAGGAATCATTATGGAATTGCATGCTGTTCTGGGTAACAAGTGGTCTACAATAGCAAAGTACTTGCCAGGAAGAACTGATAATGAGATTAAGAACTACTGGAGAACCCACTTCGGGAAGAGAGAAAAACCCAAACACAATAAGAATCAAGAAAAACGAAAAGCAAAGGTGCAAAAACAGTTGAAACAAGAGCAACAACCTCAGCCTCAGGAGTATGATATGATCAAAAGCTCCTTGTATCAAGAGGAGATAAAAAATGAAACAAAACCCTCTGAGATGCAAGACAACAAGCAACAAGAGATCATGGGTTTCATGTACCCAACAATTGAGCACCAATATAGCCTCTCTTTAATGCATCGTGAATTTTCTTCCTCATTTCTAGACACTACTACAGCAGATGATGGCTTATGGTTTAGTTTATGGGATTTTGATGAACCACAGTTCAGCAAATGTGTCATGCCAAATCAAGCTAACTTTGGAGCTGGAGGGGATTTGATGCAAAACCAAGATAAAACTTCGTGTTTCGATGTTGCTTATGATAACCTCAGCTACGGAAAATACATGTTTGATTGA | 792 | 0.4066 | MKGSLTAEKGWTKGPWTHEEDKLLREHVSLHGESRWNSVSKFTGLNRSGKSCRLRWVNYLRPGLKKGQLTPLEEGIIMELHAVLGNKWSTIAKYLPGRTDNEIKNYWRTHFGKREKPKHNKNQEKRKAKVQKQLKQEQQPQPQEYDMIKSSLYQEEIKNETKPSEMQDNKQQEIMGFMYPTIEHQYSLSLMHREFSSSFLDTTTADDGLWFSLWDFDEPQFSKCVMPNQANFGAGGDLMQNQDKTSCFDVAYDNLSYGKYMFD | 263 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4316g00014 | 263 | CDD | SANT | 70 | 111 | IPR001005 | - | |
Gabi4316g00014 | 263 | Gene3D | - | 12 | 65 | - | - | |
Gabi4316g00014 | 263 | MobiDBLite | consensus disorder prediction | 111 | 126 | - | - | |
Gabi4316g00014 | 263 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 13 | 64 | IPR017930 | - | |
Gabi4316g00014 | 263 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 65 | 115 | IPR017930 | - | |
Gabi4316g00014 | 263 | PANTHER | TRANSCRIPTION FACTOR MYB33-RELATED | 12 | 163 | - | - | |
Gabi4316g00014 | 263 | SMART | sant | 65 | 113 | IPR001005 | - | |
Gabi4316g00014 | 263 | SMART | sant | 12 | 62 | IPR001005 | - | |
Gabi4316g00014 | 263 | Pfam | Myb-like DNA-binding domain | 13 | 60 | IPR001005 | - | |
Gabi4316g00014 | 263 | Pfam | Myb-like DNA-binding domain | 67 | 110 | IPR001005 | - | |
Gabi4316g00014 | 263 | SUPERFAMILY | Homeodomain-like | 11 | 107 | IPR009057 | - | |
Gabi4316g00014 | 263 | ProSiteProfiles | Myb-like domain profile. | 8 | 60 | IPR001005 | - | |
Gabi4316g00014 | 263 | CDD | SANT | 15 | 60 | IPR001005 | - | |
Gabi4316g00014 | 263 | Gene3D | - | 68 | 144 | - | - | |
Gabi4316g00014 | 263 | ProSiteProfiles | Myb-like domain profile. | 61 | 111 | IPR001005 | - | |
Gabi4316g00014 | 263 | MobiDBLite | consensus disorder prediction | 110 | 147 | - | - | |
Gabi4316g00014 | 263 | FunFam | Myb transcription factor | 13 | 65 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4316g00014 | Gabi-Chr4316 | 120126 | 121336 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4316g00014 | 10 | 262 | MYB Transcription Factor Family | AT3G30210 | 45.283 | 1.22e-65 | 204 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gabi4316g00014 | Myb_DNA-binding | 2.1e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4316g00014 | K09422 | - | gmx:100816944 | 355.14 |