Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4316g00008 ATGAGACTTGTCATATCAGCTCTATGTGTTCTTGTGCTATTCTCTTATGCAGCTGCTTATGATCCTTTGGATCCAAACGGAAACATAACGATCAAATGGGATGTTGTGTCTTGGACACCAGATGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTTTCGGCACATAACGAATCCTGGATGGACCTTGGGATGGTCATGGGCTAAGAAAGAAGTTATATGGACCATGGTAGGAGCTCAAACCACAGAGCAAGGAGACTGCTCTAAGTTCAAAGGCAATGTACCTCACTGCTGTAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTACCTTATAACCAGCAATTCTCAAACTGCTGTAAGGGTGGAGTGGTGGCAGCATGGGGCCAAGACCCTTCATCAGCTATCTCATCCTTCCAAGTGAGTGTTGGGCAAGGTGGTACTTCAAACAAGACAGTTAAACTCCCCAAGAACTTCACACTCTTGGCTCCAGGACCAGGCTATACTTGTGGCCCTGCCAAGATTGTTCCTTCCACCACTTTCCTTACACCTGACAAACGCCGCAAGACTCAAGCTCTGATGACATGGAATGTTACCTGCACATACTCACAATTTCTGGCGAGAAAGAACCCAAGTTGCTGTGTATCTATGTCATCCTTCTACAATGAGACCATTACCCCTTGTCCCTCTTGTGCCTGTGGCTGCCAGAACAAGAAGAAAAACTGTGTCAAGATTGACTCTAAAGTTCTCAGCATGAAAGGGGTTCATACTCCAAAGAAAGACAATGAACCACTGCTGCAGTGCACACATCACATGTGCCCAATCAGGGTACACTGGCATGTGAAGCTCAACTACAAGGACTATTGGCGAGTCAAGATCGCTGTAACAAATTTCAATTACAGGATGAATTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTTTGCTTCCCTATGAGTCTATAAATGACACTGGTATGTTCTATGGCATGAAATACTTTAATGATCTCTTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAGTGCTTCTTCGGAAGGACGGGGATACGTTCACATTCAAGCAGGGATGGGCATTTCCTCGCAAGGTCTACTTTAATGGTGAAGAATGCATGCTGCCACCACCTGATACCTACCCATTCCTCCCTAATTCTTCACCTGTAAACCTACTCAACTTCCCAGCATTCGTTTTCTCTTTGCTTGTCTTGCTAGCTGTTTGGTGA 1299 0.4503 MRLVISALCVLVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMFRHITNPGWTLGWSWAKKEVIWTMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAISSFQVSVGQGGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTTFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSMSSFYNETITPCPSCACGCQNKKKNCVKIDSKVLSMKGVHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNVQSEVLLRKDGDTFTFKQGWAFPRKVYFNGEECMLPPPDTYPFLPNSSPVNLLNFPAFVFSLLVLLAVW 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4316g00008 432 PANTHER PROTEIN COBRA 8 425 IPR006918 GO:0010215|GO:0016020
Gabi4316g00008 432 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Gabi4316g00008 432 PIRSF COBRA 1 432 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4316g00008 Gabi-Chr4316 48140 50227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4316g00008 1 431 COBRA Gene Family AT3G29810 64.853 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4316g00008 - - gmx:100783410 847.425