Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4316g00004 ATGGCCCAGTCTTTCGGTCAGACCGAGATTAACTGGGACAAGCTAGATAAAACTAAGTTCTATGTCGTAGGAGCTGGACTCTTTACAGGTGTTACTGTTGCACTTTACCCAGTTTCTGTAGTGAAAACTAGGCTGCAGGTTGCTACAAAAGATGCTGTAGAGAGAAATGCATTTTCTGTTGCAAAAGGATTGCTTAAAACAGATGGCATCCCCGGTTTGTATAGAGGTTTCGGCACAGTTATCACTGGTGCAATTCCTGCCAGAATCATTTTCCTCTCAACTCTAGAGACCACAAAGGTGGCTGCCTTCAGAATGCTTGAACCATTTAGATTATCTGAAACTACCCAGGCTGCCATAGCAAATGGAGTTGCAGGCATGACATCATCGCTTTTTGCTCAATCTGTGTTTGTACCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATCCTCAGGCCATGCCCAGTATAGTGGGGGTCTGGATGTTGCTCGTAAAATTTTAAGGTCTGATGGCATCAGGGGATTGTATCGAGGTTTTGGTCTATCTGTTATTACTTATTCACCTTCTAGTGCAGTATGGTGGGCAACTTATGGCTCAAGCCAACGCTACATTTGGAGATTCTTGAACCATGGTGCCGAATACGAAGAAGGCACTCCTAGTTTGCAGAAGATTATGTTAGTGCAGGCTTCTGGAGGGATTATTGCTGGTGCAACTTCATCCTGCATTACAACCCCGTTGGATACTATCAAGACACGGTTACAGGTTATGGGACATGAAAATAGAAGCTCTATAAAACAAGTTGCTAAAGATTTAATCACTGAAGATGGTTGGAAAGGCTTATATAGAGGGTTCGGTCCAAGATTTTTTAGCATGTCAGCGTGGGGTACTTCAATGATATTGACTTACGAGTATCTGAAACGCTTATGTTCAAAAGATGAATAG 945 0.4286 MAQSFGQTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVATKDAVERNAFSVAKGLLKTDGIPGLYRGFGTVITGAIPARIIFLSTLETTKVAAFRMLEPFRLSETTQAAIANGVAGMTSSLFAQSVFVPIDVVSQKLMVQGSSGHAQYSGGLDVARKILRSDGIRGLYRGFGLSVITYSPSSAVWWATYGSSQRYIWRFLNHGAEYEEGTPSLQKIMLVQASGGIIAGATSSCITTPLDTIKTRLQVMGHENRSSIKQVAKDLITEDGWKGLYRGFGPRFFSMSAWGTSMILTYEYLKRLCSKDE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4316g00004 314 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Gabi4316g00004 314 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 313 - -
Gabi4316g00004 314 FunFam Mitochondrial substrate carrier family protein 21 313 - -
Gabi4316g00004 314 Gene3D Mitochondrial carrier domain 19 314 IPR023395 -
Gabi4316g00004 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Gabi4316g00004 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
Gabi4316g00004 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Gabi4316g00004 314 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Gabi4316g00004 314 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Gabi4316g00004 314 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Gabi4316g00004 314 Pfam Mitochondrial carrier protein 119 205 IPR018108 -
Gabi4316g00004 314 Pfam Mitochondrial carrier protein 229 313 IPR018108 -
Gabi4316g00004 314 Pfam Mitochondrial carrier protein 25 100 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4316g00004 Gabi-Chr4316 25112 30518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4316g00004 10 314 Chloroplast and Mitochondria Gene Families AT5G15640 75.570 2.51e-173 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4316g00004 K15121 - gmx:100782750 585.104