Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4316g00003 ATGCTTCTCAAATGTTTGGGTTTCATCCATTCAAAAGATACAAATGCATCTGAGGGACAGTATCCAACAGTAATAGAAGAACTAAGCCATCATTTTTCCCTGGCTGATCTTAGGAAATCAACCAATAACTTTGATGAAAACCAAATAATTGGACGTGGAGGCTTTGGTAAGGTATATAAAGGTTGTCTCCAACATAATGGTGTTGGTGATTATACAGTCGCATTAAAGCGATGGGACATGAATACCCTCGCAGAAAATCAAGAGTACTTCAAGAAGGAAGTAGAGTTGCTCTGCCAGCTTCGTCACCCTAATATGGTGTCTCTTATAGGATTCTGCAACGACAAACATGAGAAGATTATTGTGTACGAGTACATGCTCAATGGATCTTTCCACGATCATCTACGCAATAAGGACATGGAACCACTCTCATGGAAGAAAAGGCTTGAGATATGCATAGGAGCAGCATGTGGGGTGCACTACCTTCACACAGGAGCCAAGCGCACTATAATTCACCGTTTCATAAATCCTAGTAACATTCTTTTGGATAGCAATATGGTTCCCAAACTCAAATATTTTGGGCTTTCCTTACAGGGACCGCTTTTTCCATCAAAGCCAAAACTTATTAAAACTGAAGAAGTTGCAGGTACAATTGGTTTCTTAGCTCCTGAGAATTTCAACAAACCTATGCCCGGCTTAACAGATAGAAGTGATGTTTATTCCTTTGGTGTGTTTCTGTTAGAAGTGGTATGCAGAGAGTCATATACAACAATTTTAGGGGAGATATTGAGAGAACTCCCAAGTGAAGAATTAGACATGCCTATAATTTCAGATGGTGCATCTGTTCCTAACATAATGCAAAGGCTCACAGTTGAGGAGAATATTGATCCCACTCTTGCAGGAAAAATAGCACCAGAGTGTTGGAAAGTATTCATAGATATCATAGACAGATGCTTGAAGTATGAACCAAATGAAAGACCAGCTATGGGCGAAGTTGAGGTGGAACTTGAGCATGCTCTGTCATTGCAACAGGAAGCTGATGCCAACAACACTAGTGGCGAGTATAGCTTCTTATCGACCAGCATTTCTCAACCTCAACAATTACAAGAGGAGGCGCCAATTTCAGCATAG 1128 0.406 MLLKCLGFIHSKDTNASEGQYPTVIEELSHHFSLADLRKSTNNFDENQIIGRGGFGKVYKGCLQHNGVGDYTVALKRWDMNTLAENQEYFKKEVELLCQLRHPNMVSLIGFCNDKHEKIIVYEYMLNGSFHDHLRNKDMEPLSWKKRLEICIGAACGVHYLHTGAKRTIIHRFINPSNILLDSNMVPKLKYFGLSLQGPLFPSKPKLIKTEEVAGTIGFLAPENFNKPMPGLTDRSDVYSFGVFLLEVVCRESYTTILGEILRELPSEELDMPIISDGASVPNIMQRLTVEENIDPTLAGKIAPECWKVFIDIIDRCLKYEPNERPAMGEVEVELEHALSLQQEADANNTSGEYSFLSTSISQPQQLQEEAPISA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4316g00003 375 PANTHER OS07G0166700 PROTEIN 30 342 IPR045272 GO:0004714|GO:0006468
Gabi4316g00003 375 SUPERFAMILY Protein kinase-like (PK-like) 20 337 IPR011009 -
Gabi4316g00003 375 ProSiteProfiles Protein kinase domain profile. 44 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4316g00003 375 Gene3D Phosphorylase Kinase; domain 1 7 124 - -
Gabi4316g00003 375 Pfam Protein tyrosine and serine/threonine kinase 47 333 IPR001245 GO:0004672|GO:0006468
Gabi4316g00003 375 FunFam Receptor-like protein kinase ANXUR2 9 124 - -
Gabi4316g00003 375 Gene3D Transferase(Phosphotransferase) domain 1 125 360 - -
Gabi4316g00003 375 ProSitePatterns Protein kinases ATP-binding region signature. 50 76 IPR017441 GO:0005524
Gabi4316g00003 375 MobiDBLite consensus disorder prediction 352 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4316g00003 Gabi-Chr4316 13410 21231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4316g00003 11 348 Receptor kinase-like Gene Family AT3G51550 41.298 1.25e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi4316g00003 PK_Tyr_Ser-Thr 4.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4316g00003 - - adu:107486597 399.823