Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4316g00001 ATGAACCAAAATTCACACGAGATGCTGTTGGGTCATCAAGCCATGAATTCTCTCTTCTTTCTTTGGTGTGTCTGTCTTAAATTTGGAATAATGCTTCTCAAATGTTTGGGTTTCATCCATTCAAAAGATACAAATGCATCTGAGGGACAGTATCCAACAGTAATAGAAGAACTAAGCCATCATTTTTCCCTGGCTGATCTTAGGAAATCAACCAATAACTTTGATGAAAACCAAATAATTGGACGTGGAGGCTTTGGTAAGGTATATAAAGGTTGTCTCCAACATAATGGTGTTGGTGATTATACAGTCGCATTAAAGCGATGGGACATGAATACCCTCGCAGAAAATCAAGAGTACTTCAAGAAGGAAGTAGAGTTGCTCTGCCAGCTTCGTCACCCTAATATGGTGTCTCTTATAGGATTCTGCAACGACAAACATGAGAAGATTATTGTGTACGAGTACATGCTCAATGGATCTTTCCACGATCATCTACGCAATAAGGACATGGAACCACTCTCATGGAAGAAAAGGCTTGAGATATGCATAGGAGCAGCATGTGGGGTGCACTACCTTCACACAGGAGCCAAGCGCACTATAATTCACCGTTTCATAAATCCTAGTAACATTCTTTTGGATAGCAATATGGTTCCCAAACTCAAATATTTTGGGCTTTCCTTACAGGGACCGCTTTTTCCATCAAAGCCAAAACTTATTAAAACTGAAGAAGTTGCAGGTACAATTGGTTTCTTAGCTCCTGAGAATTTCAACAAACCTATGCCCGGCTTAACAGATAGAAGTGATGTTTATTCCTTTGGTGTGTTTCTGTTAGAAGTGGTATGCAGAGAGTCATATACAACAATTTTAGGGGAGATATTGAGAGAACTCCCAAGTGAAGAATTAGACATGCCTATAATTTCAGATGGTGCATCTGTTCCTAACATAATGCAAAGGCTCACAGTTGAGGAGAATATTGATCCCACTCTTGCAGGAAAAATAGCACCAGAGTGTTGGAAAGTATTCATAGATATCATAGACAGATGCTTGAAGTATGAACCAAATGAAAGACCAGCTATGGGCGAAGTTGAGGTGGAACTTGAGCATGCTCTGTCATTGCAACAGGAAGCTGATGCCAACAACACTAGTGGCGAGTATAGCTTCTTATCGACCAGCATTTCTCAACCTCAACAATTACAAGAGGAGGCGCCAATTTCAGCATAG 1218 0.4039 MNQNSHEMLLGHQAMNSLFFLWCVCLKFGIMLLKCLGFIHSKDTNASEGQYPTVIEELSHHFSLADLRKSTNNFDENQIIGRGGFGKVYKGCLQHNGVGDYTVALKRWDMNTLAENQEYFKKEVELLCQLRHPNMVSLIGFCNDKHEKIIVYEYMLNGSFHDHLRNKDMEPLSWKKRLEICIGAACGVHYLHTGAKRTIIHRFINPSNILLDSNMVPKLKYFGLSLQGPLFPSKPKLIKTEEVAGTIGFLAPENFNKPMPGLTDRSDVYSFGVFLLEVVCRESYTTILGEILRELPSEELDMPIISDGASVPNIMQRLTVEENIDPTLAGKIAPECWKVFIDIIDRCLKYEPNERPAMGEVEVELEHALSLQQEADANNTSGEYSFLSTSISQPQQLQEEAPISA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4316g00001 405 FunFam Receptor-like protein kinase ANXUR2 39 154 - -
Gabi4316g00001 405 MobiDBLite consensus disorder prediction 382 405 - -
Gabi4316g00001 405 Gene3D Transferase(Phosphotransferase) domain 1 155 390 - -
Gabi4316g00001 405 Pfam Protein tyrosine and serine/threonine kinase 77 363 IPR001245 GO:0004672|GO:0006468
Gabi4316g00001 405 Gene3D Phosphorylase Kinase; domain 1 36 154 - -
Gabi4316g00001 405 PANTHER OS07G0166700 PROTEIN 60 372 IPR045272 GO:0004714|GO:0006468
Gabi4316g00001 405 SUPERFAMILY Protein kinase-like (PK-like) 50 367 IPR011009 -
Gabi4316g00001 405 ProSiteProfiles Protein kinase domain profile. 74 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4316g00001 405 ProSitePatterns Protein kinases ATP-binding region signature. 80 106 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4316g00001 Gabi-Chr4316 13410 21537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4316g00001 29 378 Receptor kinase-like Gene Family AT3G51550 40.678 7.39e-74 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi4316g00001 PK_Tyr_Ser-Thr 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4316g00001 - - adu:107486597 406.371