Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4314g00006 ATGATTATATCCTTGAATGTAGGGCTGTTCAAAATTTTCGTCTGTTCTACCAATGCACAACTTTCTACCAATTTCTATGGCAAAACTTGTCCTAACCTTCAAACCATTGTGCGCAATGCAATGAGGCAAGCTCTCAATAAAGAAGCCCGTATGGGGGCCTCTATACTTCGCTTGTTCTTCCATGACTGCTTCGTAAATGGCTGTGATGGGTCAGTGTTGTTGGATGACAGTGCCACCTTTGTAGGTGAGAAAAATGCAGCACCTAACCAAAATTCAGCAAGGGGTTTCGAAGTGATTGATACCATTAAAACCAATGTCGAAGCTGCTTGCAAAGATACAGTGTCTTGTGCAGATATACTAGCACTCGCAGCAAGAGATGGAATAGCTCTGCTTGGAGGACCCTCATATGCAGTACCTCTTGGCAGAAGAGATGCAAGAACTGCAAGCCAAACTGCAGCCAACAACCAAATCCCTTCACCATTCTCAGACCTTTCCACCCTCACCTCCATGTTCGCCGCCAAAGGTTTAAGTGCACGTGACGTCACAGTGCTCTCTGGTGCCCACACCATAGGTCAAACAGAGTGCCAGTTTTTCAGAACTCGCATATACAATGAGACCAACATTGACACCAACTTTGCCACCTCAAGAAAGGGCAATTGCCCCCCCTCTGGTGGGGACACCAATTTGGCACCTCTTGATTCACTCACTCCAACTCGTTTTGACAACAATTACTACAGAGACCTTGTGGCTAAACGTGGCCTTCTTCACTCAGACCAAGTTCTTTTCAATGGTGGGTCTCAAGATACTTTGGTTAGGACTTATAGTACCAATAGTGTTGCTTTCTTCAGAGACTTTGCTGCTTCTATGGTGAAGTTGAGTAGTATTAGTCCTCTCACTGGGACTAATGGTGAAATCAGAAAGAATTGCAGGGTTGTGAACTAA 942 0.4501 MIISLNVGLFKIFVCSTNAQLSTNFYGKTCPNLQTIVRNAMRQALNKEARMGASILRLFFHDCFVNGCDGSVLLDDSATFVGEKNAAPNQNSARGFEVIDTIKTNVEAACKDTVSCADILALAARDGIALLGGPSYAVPLGRRDARTASQTAANNQIPSPFSDLSTLTSMFAAKGLSARDVTVLSGAHTIGQTECQFFRTRIYNETNIDTNFATSRKGNCPPSGGDTNLAPLDSLTPTRFDNNYYRDLVAKRGLLHSDQVLFNGGSQDTLVRTYSTNSVAFFRDFAASMVKLSSISPLTGTNGEIRKNCRVVN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4314g00006 313 Gene3D Peroxidase, domain 2 158 292 - -
Gabi4314g00006 313 CDD secretory_peroxidase 20 312 IPR033905 GO:0004601|GO:0042744
Gabi4314g00006 313 ProSiteProfiles Plant heme peroxidase family profile. 20 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 SUPERFAMILY Heme-dependent peroxidases 20 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Gabi4314g00006 313 FunFam Peroxidase 24 168 - -
Gabi4314g00006 313 Gene3D - 24 310 - -
Gabi4314g00006 313 FunFam Peroxidase 158 292 - -
Gabi4314g00006 313 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Gabi4314g00006 313 Pfam Peroxidase 37 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4314g00006 313 PANTHER PEROXIDASE 72-RELATED 14 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4314g00006 Gabi-Chr4314 48148 54617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4314g00006 19 309 Peroxidase AT5G05340 65.188 1.82e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4314g00006 K00430 - gmx:100810392 504.597