Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4309g00006 ATGGCATACGAAGCTGATGATGTCTTTGTTTCTTTATCCAAGAAGAGGAAGAATTCTGAAGAAACTCATGTCGCTGCTGCAAGAAAGAAGGTGTGTGTAGAGAGAAGTTGGGGTTACTCTTTGGATTTGATGCTTTATGATGACCCTTGGAAGATCAAGAAAGTCCTCAATGGCAGTGATCTTGGCAACATGAGCAGGCTCTTGCTCCATAAAGATTTTGCTGAGAATTTGGTGGTGCCGGTGTTGGATGGAGACGTTGAAAGAGGTGTTCAAGTTGAGATTTGGGATGTAGACACTGCCTCCATTCATTCTTTAATTTTCAAGAAATGGGTTTCTTCGAGAAGCTTTGTTTTCATTGGAAATTGGGTTAAAGATTTTGTATCAAGAAGAGGCTTAAAGAAAGGGGATGAGATTGGCCTTCATTGGGATCCATACAAAAATCGCTTTAATTTTTCTGTTCTTGATGCCTTTTAG 474 0.4008 MAYEADDVFVSLSKKRKNSEETHVAAARKKVCVERSWGYSLDLMLYDDPWKIKKVLNGSDLGNMSRLLLHKDFAENLVVPVLDGDVERGVQVEIWDVDTASIHSLIFKKWVSSRSFVFIGNWVKDFVSRRGLKKGDEIGLHWDPYKNRFNFSVLDAF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4309g00006 157 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 27 155 - -
Gabi4309g00006 157 Gene3D - 49 153 IPR015300 -
Gabi4309g00006 157 SUPERFAMILY DNA-binding pseudobarrel domain 48 151 IPR015300 -
Gabi4309g00006 157 CDD B3_DNA 50 155 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4309g00006 Gabi-Chr4309 28541 29014 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4309g00006 25 143 B3 DNA Binding Superfamily AT3G24650 28.571 6.43e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4309g00006 - - lang:109331497 189.889