Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4309g00002 ATGGCATACGACGCTGATGATGTCTTTGTTTCTTTATCCAAGAAGAGAAAGATTTATGAAGAAACTCATGTTGCTGCTGCAAGAAAGAAGGTGTGTGTAGAGAGAAGTTGGGGTTACTCTTTGGATTTGATGCTTTATGATGACCCTTGGAAGATCAAGAAAGTCCTCAATGGCAGTGATCTTGGCAACATGAGCAGGCTCTTGCTCCCTAAAGATTTTGCTGAGAATTTGGTGGTGCCGGTGTTGGATGGAGACGTTGAACGAGGTGTTCAAGTTGAGATTTGGGATGTAGACACTGCCTCCTTTCATTCTTTAATTTTCAAGAAGTGGGTTTCTTCAAGAAGCTATGTTTTCGTTGGAAATTGGGTTAAAGATTTTGTATCAAGAAGAGGCTTAAAGAAAGGGGATGAGATTGGCCTTCATTGGGATCCATACAAAAATCGCTTTAATTTTTCTATTCTTGATGCCTTTTAG 474 0.4008 MAYDADDVFVSLSKKRKIYEETHVAAARKKVCVERSWGYSLDLMLYDDPWKIKKVLNGSDLGNMSRLLLPKDFAENLVVPVLDGDVERGVQVEIWDVDTASFHSLIFKKWVSSRSYVFVGNWVKDFVSRRGLKKGDEIGLHWDPYKNRFNFSILDAF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4309g00002 157 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 41 155 - -
Gabi4309g00002 157 SUPERFAMILY DNA-binding pseudobarrel domain 48 151 IPR015300 -
Gabi4309g00002 157 Pfam B3 DNA binding domain 54 154 IPR003340 GO:0003677
Gabi4309g00002 157 CDD B3_DNA 50 155 IPR003340 GO:0003677
Gabi4309g00002 157 Gene3D - 49 153 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4309g00002 Gabi-Chr4309 22024 22497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4309g00002 25 143 B3 DNA Binding Superfamily AT3G24650 29.412 8.96e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gabi4309g00002 B3 1.2e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4309g00002 - - lang:109331497 191.43