Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4302g00048 ATGGCTGCACAAGCTCTGATATCGTCATCATCTCTCACCTTCTCAGCCGAGGCTGCCAGACAGAGTCTTGGAGCAAGATCACTCCAATCTCCTACTGGGTTCTCCAGAAAAGGCTCCTTTATTGTCAAGGCAGCTTCTACTCCCCCTGTTAAGCAAGGAGCAGATAGACAATTGTGGTTTGCATCAAAGCAGAGTCTTTCTTACTTGGATGGAAGCCTTCCCGGTGACTTTGGATTTGACCCTTTGGGACTTTCAGACCCTGAGGGAACAGGAGGGTTCATTGAGCCCAGATGGCTAGCATATGGTGAGATCATCAATGGTCGTTTTGCAATGTTGGGTGCAGTTGGTGCTATAGCACCTGAAATTCTTGGCAAGGCTGGTCTGATTCCTGAGGAAACAGCCCTCCCATGGTTCAGAACTGGTGTAATTCCACCTGCAGGAACATACAACTACTGGGCAGACCCTTACACGCTCTTTGTGTTGGAGATGGCACTTATGGGATTTGCAGAGCACAGGAGATTCCAAGATTGGGCCAAACCTGGCTCTATGGGCAAGCAGTACTTCTTAGGACTAGAAAAAGGTCTAGGAGGTTCTGGCGACCCAGCTTACCCTGGAGGACCTTTCTTTAACCCTCTTGGTTTTGGTAAGGATGAGAAATCCATGAAGGATTTGAAGCTCAAGGAAGTGAAGAATGGGAGGTTGGCTATGTTGGCAGTCTTGGGTTACTTTATTCAAGGTCTTGTGACAGGAGTTGGGCCATACCAAAACCTCCTAGATCATCTTGCTGATCCCGTGAACAACAACGTCTTGACCAGTCTCAAGTTCCACTAA 831 0.4813 MAAQALISSSSLTFSAEAARQSLGARSLQSPTGFSRKGSFIVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAVGAIAPEILGKAGLIPEETALPWFRTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAVLGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4302g00048 276 Gene3D Chlorophyll a/b binding protein domain 57 275 - -
Gabi4302g00048 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 271 IPR001344 GO:0009765|GO:0016020
Gabi4302g00048 276 Pfam Chlorophyll A-B binding protein 67 245 IPR022796 -
Gabi4302g00048 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Gabi4302g00048 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4302g00048 Gabi-Chr4302 523609 524988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4302g00048 1 276 Chloroplast and Mitochondria Gene Families AT1G61520 85.145 6.38e-167 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4302g00048 K08909 - qsa:O6P43_014419 521.931