Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4302g00026 ATGGGAGAGAGACAGAGGGAGGAGCTGGTGAGTGCAAAGCAAGTATCTGATGAAGATGCGTTCCTATTTTTCATGAACCCGGATGCACCTGCCATGCTGGACCGATTGTTGCGCCTCTTGGCTAGCTATAACATCCTCACATGTGAACTCCCTCTTGGTAAGGCTGAAAGGCATTATGGTCTTAACCCTTTGGCCAAATACTTTGTCAACAATCAAGATGGTGTCTCCATGATTGCTCCCTTTCTCATTAATCACGACAAAGTCCTCGGAGACATGTGGTACCACTTGACAGATTCAATTAAGGAGGGTGGCCTTCCATTTGACAATGCTTATGGAATGACTTTCTTTGAATTCCATGGCACAAATCCAAGGATCAACAAGCTTTTCAACAAGGGGATGTCCGATTGCTCTAGCATCGTAATGAAGAAAATTCTTGAGACCTATACAGGCTTTGAGGGTCTTGGATCCATGGTTGATGTTGGAGGTTGTACTGGAGCTATTGCTAACATGATTGTCTCCAAGTATCCCACAATAAAGGGCATTAATTTTGACTTGCCCCACGTTATTAAAGAGGCTCCATCTTATCCAGGTGTGGAGCATGTTGGTGGAGACATGTTTGTCAGTGTTCCAAAAGGTGACGCCATTTTCATGAAGTGGATATGTCATGACTGGAATGATGAGCAATGCTTGAAACTTTTGAAGAACTGCTATGATTCCATTCCTGAAACGGGGAAGGTGATTTTGGCTGAATTCAATATTCCAGTAACCCCGGATTCTAACTTGGCCACAAAGTGTCTGTTTCAAATGGATGTTTTAATGTTGTGTCATACCTCAGGTGGAAAAGAGAGAACAGAGAAAGAGTTCGAGGCTTTGGCTAAGGGGGCTGGTTTCCAAGGTTTCCGTGTAGCGTGCTCTGCTTTCAACTTTTATGTCATGGAATTTCTTAAGAAGGCTTAA 957 0.4357 MGERQREELVSAKQVSDEDAFLFFMNPDAPAMLDRLLRLLASYNILTCELPLGKAERHYGLNPLAKYFVNNQDGVSMIAPFLINHDKVLGDMWYHLTDSIKEGGLPFDNAYGMTFFEFHGTNPRINKLFNKGMSDCSSIVMKKILETYTGFEGLGSMVDVGGCTGAIANMIVSKYPTIKGINFDLPHVIKEAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWNDEQCLKLLKNCYDSIPETGKVILAEFNIPVTPDSNLATKCLFQMDVLMLCHTSGGKERTEKEFEALAKGAGFQGFRVACSAFNFYVMEFLKKA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4302g00026 318 PIRSF O-mtase 4 316 IPR016461 GO:0008168
Gabi4302g00026 318 SUPERFAMILY "Winged helix" DNA-binding domain 25 71 IPR036390 -
Gabi4302g00026 318 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 316 IPR016461 GO:0008168
Gabi4302g00026 318 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 73 314 IPR029063 -
Gabi4302g00026 318 Pfam O-methyltransferase domain 93 298 IPR001077 GO:0008171
Gabi4302g00026 318 Gene3D Vaccinia Virus protein VP39 126 305 IPR029063 -
Gabi4302g00026 318 PANTHER O-METHYLTRANSFERASE 11 301 IPR016461 GO:0008168
Gabi4302g00026 318 FunFam Caffeic acid O-methyltransferase 69 316 - -
Gabi4302g00026 318 Gene3D - 25 144 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4302g00026 Gabi-Chr4302 330020 342200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4302g00026 26 317 Monolignol Biosynthesis Gene Families AT5G54160 66.102 1.72e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4302g00026 K13066 - gmx:100780100 451.055