Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4302g00025 ATGGGAGAGAGACAGAGGGAGGAGGTGGTGAGTGCAAAGCAAGTATCTGATGAAGATGCGTTCCTATTTTCCATGCAACTAGCAGGTGCCACCGCTGTTCCTATGGTGCTGAAGTCAGCTTTAGAGCTTGGTATCATAGAAACCATAGCCAAAGCTGGTGATGGAGCTTATCTTTCTCCTTCTAATATTGCTTCTCAGCTCCCAATAATTAAGAACCCGGATGCACCCGCCATGCTGGACCGATTGTTGCGCCTCTTGGCTAGCTATAACATCCTCACATGCGAACTCCCTCTTGGTAAGGCTGAAAGGCATTATGGTCTTAACCCTTTGGCCAAATACTTTGTCAACAATCAAGATGGTGTCTCCATGATTGCTCCCTTTCTCATGCAACACGACAAAGTCCTCAAAGACATGTGGTACCACTTGACAGATTCAATTAAGGAGGGTGGCCTTCCATTTGACAATGCTTATGGAATGACTTCCTTTGAATTCCATGGCACAAATCCAAGGTTCAACAAGCTTTTCAACAAGGGGATGTCCGATTGCTCTAGCATCATAATGAAGAAAATTCTTGAGACCTATACAGGCTTTGAGGGTCTTGGATCCATGGTTGATGTTGGAGGTGGGACTGGAGCTATTACTAACATGATTGTCTCCAAGTATCCCACCATAAAGGGCATTAATTTTGACTTGCCCCACGTTATTAAAGAGGCTCCATCTTATCCAGGTGTGGAGCATGTTGGTGGAGACATGTTTGTCAGTGTTCCAAAAGGTGACGCCATTTTCATGAAGTGGATATGTCATGACTGGAATGATGAGCAATGCTTGAAACTTTTGAAGAACTGCTATGATTCCATTCCTGAAACGGGGAAGGTGATTTTGGCTGAATCCAATATTCCAGTAACCCCGGATTCTAACTTGGCCACAAAGTGTCTGTTTCAAATGGATGTTATAATGTTGTGTCATAGCTCAGGCGGAAAAGAGAGAACAGAGAAAGAGTACGAGGCTTTGGCTAAGGGGGCTGGATTCCAAGGCTTCCGAGTAGCGTGCTCTGTTTTCAACTTTTATGTCATGGAATTTCTTAAGAAGGCTTAA 1095 0.4429 MGERQREEVVSAKQVSDEDAFLFSMQLAGATAVPMVLKSALELGIIETIAKAGDGAYLSPSNIASQLPIIKNPDAPAMLDRLLRLLASYNILTCELPLGKAERHYGLNPLAKYFVNNQDGVSMIAPFLMQHDKVLKDMWYHLTDSIKEGGLPFDNAYGMTSFEFHGTNPRFNKLFNKGMSDCSSIIMKKILETYTGFEGLGSMVDVGGGTGAITNMIVSKYPTIKGINFDLPHVIKEAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWNDEQCLKLLKNCYDSIPETGKVILAESNIPVTPDSNLATKCLFQMDVIMLCHSSGGKERTEKEYEALAKGAGFQGFRVACSVFNFYVMEFLKKA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4302g00025 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 362 IPR016461 GO:0008168
Gabi4302g00025 364 SUPERFAMILY "Winged helix" DNA-binding domain 16 117 IPR036390 -
Gabi4302g00025 364 PANTHER O-METHYLTRANSFERASE 25 347 IPR016461 GO:0008168
Gabi4302g00025 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 360 IPR029063 -
Gabi4302g00025 364 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Gabi4302g00025 364 FunFam Caffeic acid 3-O-methyltransferase 3 114 - -
Gabi4302g00025 364 Pfam Dimerisation domain 35 87 IPR012967 GO:0046983
Gabi4302g00025 364 Pfam O-methyltransferase domain 139 344 IPR001077 GO:0008171
Gabi4302g00025 364 CDD AdoMet_MTases 204 294 - -
Gabi4302g00025 364 Gene3D - 3 114 IPR036388 -
Gabi4302g00025 364 FunFam Caffeic acid O-methyltransferase 115 362 - -
Gabi4302g00025 364 Gene3D Vaccinia Virus protein VP39 115 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4302g00025 Gabi-Chr4302 324687 328392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4302g00025 7 363 Monolignol Biosynthesis Gene Families AT5G54160 63.611 1.31e-171 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4302g00025 K13066 - gmx:100780100 523.472