Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi429g00006 ATGGACTTGGTTGCTCAGAGATATCTTGTTACTGTCAGCGGAAATGATGGGAAAAGAGTTGTATCTGATGCTTGGGCTTTGGATACTGCTCAAAAACCTTATGTGTGGCAGAGGCTGAACCCAGAAGGTGATAGACCTTCCGCTAGAATGTATGCAACTGCTAGTGCCCGCTCAGATGGAATGTTTTTGCTGTGTGGTGGAAGGGACTCTACTGGAACTCCACTCGCAGACGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCACCTGGAGTTTCCCCTGCACCAAGGTATCAACATGCCGCGGTTTTTGTTGGTGCGAGATTGCATGTTACAGGAGGTGTTCTCAGGGGTGGACGGGCTGTGGAAGGCGAAGCAGCTGTTGCAGTATTGGACACCGCTGCTGGGGTTTGGTTGGACAGAAATGGCATTGTGTCCTCCTCACGCTCAAACAAAGGTCATGATTCTGACCCTTCTTTGGAGCTTATGCGTCGTTGTCGCCATGCTGCAGCAGCTGTTGGTGTTCATATATATATCTATGGCGGTCTTAGAGGAGATATACTACTAGATGATTTTTTAGTTGCTGAAAATTCACCATATCAGCCCGACAATAATTCTCCTGTGTTAATGGCTGAGAGAGCTTCACCTGTTACAAGCCCCAAACACAATCATTCTAACTCGAATCCCTCATCTGGTGGCTCAGGCATGGACGAAAATTCCATGGAGAAACTGAGGGAGGCATCAGCTGCTGAAGCTAAGGCAGCGAGTGCTGTATGGCAAGCTGTGCAGTCTATATCAAGTAGTCCTGCAGAAGAAACATCTGTCTCAGATGACAACTCACAAGCTGCAGAAACAGTTTCAGATGGAAGTGACACAGAGGGAGATGTTCGCCTTCATCCTAGAGCTGTTGTAGTTGCTAAAGAGGCTGTAGGTAACCTAGGTGGAATGGTGAGACAATTATCACTAGATCAATTTGAAAATGAAAGCAGACGCATGGTTCCCATAAATAATGATTCGCCATATCCTACGAAAAAGTTCACCAGACAGAAATCCCCTCAGGGTTTACATAAAAAGATAATTTCTACTTTGCTTCGGCCTCGCAACTGGAAAGCTCCAGCAAACAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTTTGCTATGCTGCTGAGCAAATATTTATGCATGAACCAACTGTTCTTCAGCTTAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGGTTTCCTTCAACTGCAGGAGACATCACGTATATTGACTACCTGTTTTTGGGAGATTATGTTGATCGAGGACAGCACAGCTTGGAAACAATCACCTTGCTTCTTGCTCTTAAGATTGAATATCCTGAGAATGTTCACTTGATACGTGGAAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATAGAGTGCATTGAAAGAATGGGAGAAAATGATGGAATATGGGCATGGACACGTTTCAATCAACTTTTTAACTATCTTCCGCTAGCTGCTCTTATTGAAAAGAAAATTATCTGTATGCATGGTGGCATTGGAAGATCTATCCATTCAATAGAACAGATAGAGAAGCTTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTTTTATGGTCTGATCCCACAGAAAATGATAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGGCCAGGGCTTGTCACTTTTGGGCCTGATCGCGTCATGGAATTCTGTAAGAGAAATAAATTGCAGCTCATTATAAGGGCCCATGAATGTGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAATTAATCACACTTTTTTCTGCAACTAACTATTGTGGAACTGCAAACAATGCGGGAGCTATACTGGTAGTTGGTAGGGGCTTGGTTGTGGTTCCAAAATTGATTCATCCCTTACCACCTCCCCTTCAGTCCCCCGAGACATCTCCTGAGCGTGTCATGGATGAGACATGGATGCAGGAGCTTAATATTCAGAGACCACCAACTCCTACTAGGGGTCGACCACAGCCTGACCTTGACCGTGGCTCACTAGCATATATATGA 2148 0.4483 MDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSTGTPLADAYGLLMHRNGQWEWTLAPGVSPAPRYQHAAVFVGARLHVTGGVLRGGRAVEGEAAVAVLDTAAGVWLDRNGIVSSSRSNKGHDSDPSLELMRRCRHAAAAVGVHIYIYGGLRGDILLDDFLVAENSPYQPDNNSPVLMAERASPVTSPKHNHSNSNPSSGGSGMDENSMEKLREASAAEAKAASAVWQAVQSISSSPAEETSVSDDNSQAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPINNDSPYPTKKFTRQKSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSIHSIEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi429g00006 715 SUPERFAMILY Kelch motif 6 200 IPR015915 GO:0005515
Gabi429g00006 715 SMART pp2a_7 384 670 IPR006186 GO:0016787
Gabi429g00006 715 FunFam Serine/threonine-protein phosphatase 39 207 - -
Gabi429g00006 715 PIRSF STPPP_BSU1 1 715 IPR012391 GO:0004721|GO:0009742
Gabi429g00006 715 Pfam Serine-threonine protein phosphatase N-terminal domain 363 410 IPR031675 -
Gabi429g00006 715 Gene3D - 345 686 IPR029052 -
Gabi429g00006 715 Pfam Calcineurin-like phosphoesterase 412 619 IPR004843 GO:0016787
Gabi429g00006 715 SUPERFAMILY Metallo-dependent phosphatases 365 676 IPR029052 -
Gabi429g00006 715 MobiDBLite consensus disorder prediction 219 254 - -
Gabi429g00006 715 FunFam Serine/threonine-protein phosphatase 349 688 - -
Gabi429g00006 715 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 219 715 - -
Gabi429g00006 715 Gene3D - 3 218 IPR015915 GO:0005515
Gabi429g00006 715 PRINTS Serine/threonine phosphatase family signature 480 504 IPR006186 GO:0016787
Gabi429g00006 715 PRINTS Serine/threonine phosphatase family signature 548 575 IPR006186 GO:0016787
Gabi429g00006 715 PRINTS Serine/threonine phosphatase family signature 608 628 IPR006186 GO:0016787
Gabi429g00006 715 PRINTS Serine/threonine phosphatase family signature 412 439 IPR006186 GO:0016787
Gabi429g00006 715 PRINTS Serine/threonine phosphatase family signature 518 544 IPR006186 GO:0016787
Gabi429g00006 715 PRINTS Serine/threonine phosphatase family signature 447 474 IPR006186 GO:0016787
Gabi429g00006 715 PRINTS Serine/threonine phosphatase family signature 630 646 IPR006186 GO:0016787
Gabi429g00006 715 MobiDBLite consensus disorder prediction 690 715 - -
Gabi429g00006 715 ProSitePatterns Serine/threonine specific protein phosphatases signature. 481 486 IPR006186 GO:0016787
Gabi429g00006 715 MobiDBLite consensus disorder prediction 223 242 - -
Gabi429g00006 715 MobiDBLite consensus disorder prediction 273 293 - -
Gabi429g00006 715 MobiDBLite consensus disorder prediction 273 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi429g00006 Gabi-Chr429 28296 36911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi429g00006 413 611 Calmodulin-binding Proteins AT5G63870 32.174 2.41e-27 111