Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi429g00005 ATGGGGTCGAAGCCATGGCTGCACCCCGCTTCCACTTATGGTCCTCTTGAAACCTACTGGGACACCGATGAAGATGCTCCTGGTCCTCGCTGTGGTCATACGCTCACCGCCGTCGCTGCCACCAAGTCACTTGGTCCCCGCTTGATCCTCTTCGGCGGCGCCACTGCCATTGAAGGAGGATCTTCTTCAGCTCCCGGCATTCGGTTAGCTGGAGTCACAAATTCGGTCCATTCTTATGACATTCAGACTAGAAAATGGACTAGTATTAAGCCTGCCGGAGAGCCGCCGTCTCCTCGGGCTGCTCATGCCGCTGCTGCAGTTGGAACAATGGTTGTTTTTCAGGGTGGGATAGGTCCTGCTGGACATTCTACTGATGATCTCTATGTGCTTGACCTGACCAATGATAAATACAAATGGCACAGGGTCGTCGTACAAGGGCAAGGACCCGGGCCTCGCTACGGCCATGTAATGGACTTGGTTGCTCAGAGATATCTTGTTACTGTCAGCGGAAATGATGGGAAAAGAGTTGTATCTGATGCTTGGGCTTTGGATACTGCTCAAAAACCTTATGTGTGGCAGAGGCTGAACCCAGAAGGTGATAGACCTTCCGCTAGAATGTATGCAACTGCTAGTGCCCGCTCAGATGGAATGTTTTTGCTGTGTGGTGGAAGGGACTCTACTGGAACTCCACTCGCAGACGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCACCTGGAGTTTCCCCTGCACCAAGGTATCAACATGCCGCGGTTTTTGTTGGTGCGAGATTGCATGTTACAGGAGGTGTTCTCAGGGGTGGACGGGCTGTGGAAGGCGAAGCAGCTGTTGCAGTATTGGACACCGCTGCTGGGGTTTGGTTGGACAGAAATGGCATTGTGTCCTCCTCACGCTCAAACAAAGGTCATGATTCTGACCCTTCTTTGGAGCTTATGCGTCGTTGTCGCCATGCTGCAGCAGCTGTTGGTGTTCATATATATATCTATGGCGGTCTTAGAGGAGATATACTACTAGATGATTTTTTAGTTGCTGAAAATTCACCATATCAGCCCGACAATAATTCTCCTGTGTTAATGGCTGAGAGAGCTTCACCTGTTACAAGCCCCAAACACAATCATTCTAACTCGAATCCCTCATCTGGTGGCTCAGGCATGGACGAAAATTCCATGGAGAAACTGAGGGAGGCATCAGCTGCTGAAGCTAAGGCAGCGAGTGCTGTATGGCAAGCTGTGCAGTCTATATCAAGTAGTCCTGCAGAAGAAACATCTGTCTCAGATGACAACTCACAAGCTGCAGAAACAGTTTCAGATGGAAGTGACACAGAGGGAGATGTTCGCCTTCATCCTAGAGCTGTTGTAGTTGCTAAAGAGGCTGTAGGTAACCTAGGTGGAATGGTGAGACAATTATCACTAGATCAATTTGAAAATGAAAGCAGACGCATGGTTCCCATAAATAATGATTCGCCATATCCTACGAAAAAGTTCACCAGACAGAAATCCCCTCAGGGTTTACATAAAAAGATAATTTCTACTTTGCTTCGGCCTCGCAACTGGAAAGCTCCAGCAAACAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTTTGCTATGCTGCTGAGCAAATATTTATGCATGAACCAACTGTTCTTCAGCTTAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGGTTTCCTTCAACTGCAGGAGACATCACGTATATTGACTACCTGTTTTTGGGAGATTATGTTGATCGAGGACAGCACAGCTTGGAAACAATCACCTTGCTTCTTGCTCTTAAGATTGAATATCCTGAGAATGTTCACTTGATACGTGGAAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATAGAGTGCATTGAAAGAATGGGAGAAAATGATGGAATATGGGCATGGACACGTTTCAATCAACTTTTTAACTATCTTCCGCTAGCTGCTCTTATTGAAAAGAAAATTATCTGTATGCATGGTGGCATTGGAAGATCTATCCATTCAATAGAACAGATAGAGAAGCTTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTTTTATGGTCTGATCCCACAGAAAATGATAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGGCCAGGGCTTGTCACTTTTGGGCCTGATCGCGTCATGGAATTCTGTAAGAGAAATAAATTGCAGCTCATTATAAGGGCCCATGAATGTGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAATTAATCACACTTTTTTCTGCAACTAACTATTGTGGAACTGCAAACAATGCGGGAGCTATACTGGTAGTTGGTAGGGGCTTGGTTGTGGTTCCAAAATTGATTCATCCCTTACCACCTCCCCTTCAGTCCCCCGAGACATCTCCTGAGCGTGTCATGGATGAGACATGGATGCAGGAGCTTAATATTCAGAGACCACCAACTCCTACTAGGGGTCGACCACAGCCTGACCTTGACCGTGGCTCACTAGCATATATATGA 2616 0.466 MGSKPWLHPASTYGPLETYWDTDEDAPGPRCGHTLTAVAATKSLGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDIQTRKWTSIKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSTGTPLADAYGLLMHRNGQWEWTLAPGVSPAPRYQHAAVFVGARLHVTGGVLRGGRAVEGEAAVAVLDTAAGVWLDRNGIVSSSRSNKGHDSDPSLELMRRCRHAAAAVGVHIYIYGGLRGDILLDDFLVAENSPYQPDNNSPVLMAERASPVTSPKHNHSNSNPSSGGSGMDENSMEKLREASAAEAKAASAVWQAVQSISSSPAEETSVSDDNSQAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPINNDSPYPTKKFTRQKSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSIHSIEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi429g00005 871 Gene3D - 501 842 IPR029052 -
Gabi429g00005 871 MobiDBLite consensus disorder prediction 379 398 - -
Gabi429g00005 871 Gene3D - 3 193 IPR015915 GO:0005515
Gabi429g00005 871 MobiDBLite consensus disorder prediction 429 459 - -
Gabi429g00005 871 MobiDBLite consensus disorder prediction 429 449 - -
Gabi429g00005 871 PIRSF STPPP_BSU1 1 871 IPR012391 GO:0004721|GO:0009742
Gabi429g00005 871 CDD MPP_Bsu1_C 520 822 IPR041758 -
Gabi429g00005 871 FunFam Serine/threonine-protein phosphatase 505 844 - -
Gabi429g00005 871 SUPERFAMILY Kelch motif 70 356 IPR015915 GO:0005515
Gabi429g00005 871 Pfam Galactose oxidase, central domain 29 96 - -
Gabi429g00005 871 PRINTS Serine/threonine phosphatase family signature 568 595 IPR006186 GO:0016787
Gabi429g00005 871 PRINTS Serine/threonine phosphatase family signature 636 660 IPR006186 GO:0016787
Gabi429g00005 871 PRINTS Serine/threonine phosphatase family signature 764 784 IPR006186 GO:0016787
Gabi429g00005 871 PRINTS Serine/threonine phosphatase family signature 786 802 IPR006186 GO:0016787
Gabi429g00005 871 PRINTS Serine/threonine phosphatase family signature 674 700 IPR006186 GO:0016787
Gabi429g00005 871 PRINTS Serine/threonine phosphatase family signature 704 731 IPR006186 GO:0016787
Gabi429g00005 871 PRINTS Serine/threonine phosphatase family signature 603 630 IPR006186 GO:0016787
Gabi429g00005 871 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 376 871 - -
Gabi429g00005 871 MobiDBLite consensus disorder prediction 375 410 - -
Gabi429g00005 871 FunFam Serine/threonine-protein phosphatase 9 192 - -
Gabi429g00005 871 SUPERFAMILY Metallo-dependent phosphatases 521 832 IPR029052 -
Gabi429g00005 871 Gene3D - 194 425 IPR015915 GO:0005515
Gabi429g00005 871 Pfam Galactose oxidase, central domain 115 155 - -
Gabi429g00005 871 Pfam Serine-threonine protein phosphatase N-terminal domain 519 566 IPR031675 -
Gabi429g00005 871 FunFam Serine/threonine-protein phosphatase 195 363 - -
Gabi429g00005 871 SMART pp2a_7 540 826 IPR006186 GO:0016787
Gabi429g00005 871 Pfam Calcineurin-like phosphoesterase 568 775 IPR004843 GO:0016787
Gabi429g00005 871 MobiDBLite consensus disorder prediction 846 871 - -
Gabi429g00005 871 ProSitePatterns Serine/threonine specific protein phosphatases signature. 637 642 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi429g00005 Gabi-Chr429 28296 37437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi429g00005 569 767 Calmodulin-binding Proteins AT5G63870 32.174 4.73e-27 110