Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi429g00002 ATGAAGATCACGTTTTTCCTAGTAGCTTGTGTGGTACATTTGTGTTTCCTTGGTGTTTGTCAAGGAGGCAGCCTCAGAAAGGAGTTCTACCGGCATTCCTGCCCTCAAGCCGAGGACATCATAAACAACAAAACCCAGCAGCATGTCTCTGCCAATCCCAATTTGCCCGCCAAGTTGCTTAGAATGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGCTCGGTTCTGTTGAACTCCACTGCAAATAATACTGCAGAGAAGGATGCAATTCCTAATTTAACATTGTCTGGCTTTGATGTCATTGATGATATTAAAGCTGCGGTGGAAGCAACATGTCCCCAAACTGTATCCTGTGCTGACATTGTGGCATTGGCAGCTAGGGACGCTGTTTCTTTCAATAAAACAATGTGGGAAGTGCTGACTGGTAGAAGAGATGGCACAGTATCAAACAGTAGCGAAGCCTTGGCCAACATCCCACGACCTACCTTCAACTTCACCCAACTCAAACAAAGCTTTGCTAGTAAAGATCTCAATGTGCACGATCTGGTTGTATTATCAGGAGCACACACAATTGGAATAGGTCATTGCAGCTCGTTCAGTAACAGGCTTTATAATTTCACGGGAAAGGGTGATCAAGACCCTTCATTAAATACCACTTATGCTGCATTTTTGAAGACTAAATGCCAGAGCCTGAGTGACACAACAACAACGGTAGAAATGGATCCTGGCAGCTCTACCAATTTCGATAGTGACTATTATCCAAACCTTCTACAGAAAAAGGGTCTGTTCCAATCAGATGCTGCCCTTCTAACAAAAGATGAGTCAACAGATATTGCTAAAGAATTGGTTAAACAAAACAAGTTCTTCACAGAGTTCGCGCAGTCAATGAAGAGGATGGGAGCCATTCAGGTCCTCACAGGCTCCGCTGGGGAAATTCGAATTAAGTGTTCGGTTGTCAACTCATAA 969 0.4376 MKITFFLVACVVHLCFLGVCQGGSLRKEFYRHSCPQAEDIINNKTQQHVSANPNLPAKLLRMHFHDCFVRGCDGSVLLNSTANNTAEKDAIPNLTLSGFDVIDDIKAAVEATCPQTVSCADIVALAARDAVSFNKTMWEVLTGRRDGTVSNSSEALANIPRPTFNFTQLKQSFASKDLNVHDLVVLSGAHTIGIGHCSSFSNRLYNFTGKGDQDPSLNTTYAAFLKTKCQSLSDTTTTVEMDPGSSTNFDSDYYPNLLQKKGLFQSDAALLTKDESTDIAKELVKQNKFFTEFAQSMKRMGAIQVLTGSAGEIRIKCSVVNS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi429g00002 322 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 SUPERFAMILY Heme-dependent peroxidases 25 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 FunFam Peroxidase 160 300 - -
Gabi429g00002 322 CDD secretory_peroxidase 25 320 IPR033905 GO:0004601|GO:0042744
Gabi429g00002 322 PANTHER PEROXIDASE 25-RELATED 12 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Gabi429g00002 322 Gene3D Peroxidase, domain 2 160 300 - -
Gabi429g00002 322 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 FunFam Peroxidase 28 169 - -
Gabi429g00002 322 Pfam Peroxidase 43 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi429g00002 322 Gene3D - 28 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi429g00002 Gabi-Chr429 4648 6128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi429g00002 1 322 Peroxidase AT1G05260 57.055 1.58e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi429g00002 K00430 - gmx:100799691 551.592