Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4299g00006 ATGGACTGGGATCTGCAAGCTATTGTGGGATGCATCAGTGAGGCCCCAGCCACCACCATGGACACCCCACATCTTAGTTTTTCTCATTTCTGTTGTGAACAAGGTGACCTACTTTGCAATTTTCAGGAATTCTCAGAAACCACAACGGTCGTCGATGAATTGGAAGAGTTATACAAACCTCTTTCCATCTCTACAATTTCCCTCCCTATCCCTGAAGAAACCGAAGAAGTCAAAGTACCATCAAACAAAGTAGCTGTACAAGATTTGCGAGATCCAGCAGCATCTAAATGTTGTAAAAGAAGTGATAAATTCAGCAAGAAGAACAAGAGGGTGAAGTATGTGACAGCAGCAGATGGTGTTTCCGACCCATGGGCATGGCGTAAATATGGACAGAAACCAATAAAGGGATCTCCCTATCCACGTAGCTATTATAGGTGTAGCAGCTACAAAGGATGTTTGGCTAGGAAACTGGTGGAACGGAGCCATTTGGATCCTGAAGTTTTCATAGTTACCTACACAGCAGAACATAGTCATCCTCACCCAACTCGCAAAAACCCACGAGCAGGGAACAAACAGAAGAAAAACAGTTCGATAATTGCACCTCCAAGCACTCATGATCAAAACACTTTTACTCCTAATTCCACAGCAGTACTTCTCTTTCCAAGGACTTCACCTGTAGTGGTGGAGTCCATTGAAGAAGTGCTTGAACAGAGTAAGGTGTTGAAGAAAGAGGAAGATTTTGTGGATGGTGATGGTTGGTTTCCAAGCATCGAGCTAGCTAGAGAAACTAAATGGACTTGA 801 0.4357 MDWDLQAIVGCISEAPATTMDTPHLSFSHFCCEQGDLLCNFQEFSETTTVVDELEELYKPLSISTISLPIPEETEEVKVPSNKVAVQDLRDPAASKCCKRSDKFSKKNKRVKYVTAADGVSDPWAWRKYGQKPIKGSPYPRSYYRCSSYKGCLARKLVERSHLDPEVFIVTYTAEHSHPHPTRKNPRAGNKQKKNSSIIAPPSTHDQNTFTPNSTAVLLFPRTSPVVVESIEEVLEQSKVLKKEEDFVDGDGWFPSIELARETKWT 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4299g00006 266 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 71 210 IPR044810 GO:0003700
Gabi4299g00006 266 MobiDBLite consensus disorder prediction 174 210 - -
Gabi4299g00006 266 SMART WRKY_cls 120 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4299g00006 266 ProSiteProfiles WRKY domain profile. 115 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4299g00006 266 Pfam WRKY DNA -binding domain 122 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4299g00006 266 SUPERFAMILY WRKY DNA-binding domain 114 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4299g00006 266 MobiDBLite consensus disorder prediction 191 210 - -
Gabi4299g00006 266 Gene3D WRKY domain 104 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4299g00006 Gabi-Chr4299 42460 43634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4299g00006 2 258 WRKY Transcription Factor Family AT4G01250 37.847 6.81e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4299g00006 WRKY 6.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4299g00006 K13426 - gmx:102667019 261.151