LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi4294g00005	ATGGCAGAGGTTATTAACATGCCCCCTGATTCTCTCGACAAATCTCCATCCTCTTCCGCTCCCCCTCCTCCTCCTCCTCCGCCGCCACTTCCTTCTTCTTCCGCCGTCGATGACGATCTCCCTCCGCCGCCGCATTCCTCGTTCCGGAGGAGGGACAGGGATTCCAGGGACAGGAGGGACGATAGGGATTACGATCGACCTCCGAACCGCCGCGGAGGAGGCGGCGCCGATTACTACGACAGAGACAGGAACATGTCGCCGCCACCGCCCCCGCCGAGGGACAGAGACAGAGACCGGGACTTCAAGCGCCGCCGCAGCCCGAGCCCTTCCCATCGCGACCGGCGTTATTCTCCAGCGTTGCGGCGCTCGCCTCCGCCTTACAAGCGGCCTAGGAGGGGCAGTCCACGCGGCGGTTACGGACCCGATGACAGCAGACTTGGATATGATTATTATGGCGGTTACGATCGGGGAGTGGGTGGACGACTTGGTTATGTAGATGAGAAGTCTTATGGCAGGTTTGGACATCGTTCTGCAGGGGGATATCAAAATGGGATTTCTGATATGGAACCCAATCGTGGTTATTCAGACTTGCCAAGTGGCGGTGCACAAAGAGAGGGGTTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATTCTACCGGCTGAAGCAGAACGTAGGTATCAAGAATACAAATCAGAATACATTTCTACCCAAAAACAAGCTTATTTTAATGCTCACAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAGTGCTCGCCAGCTGGCAAAGGATTTTTTGCTTGATCTGCAGAGTGGAACATTAGACCTAAATCCCGGATTAAATACCTCTTCATCCAGCAAATCAGGGCAAGCTAGCGAGCCAAATTCAGAGGAGGAACCAGACACTGGAGGTAAACGAAGAAGACATGGTAGGGGATCTAATAAAGAAAATGATTTCTCAGCTGCTCCAAAGTCTCACCCTATCAGTTCTGAACCCAGACGAATACAAGCAGATATTCAACAGGCTCAGGCCCTTGTACGTAAACTTGACTTAGAAAAGGGGATTGAAGATAATATTTTATCCAGCAGTGATCACAGCAAAAATGATGATAAGACTCATAGTGGATCTGTGGGTCCTATAATAATTATACGAGGCCTAACATCTGTTAAGGGTTTAGAGGGTGTTGAGCTTCTGGACACACTTATTACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGCATGATTGAGACTAGTGAGGCTAAGGGTTTTAGGCATGTGAGAGCAGAAGGAACAGGGCATGAAGAAAAAGGTAAATCAGGGTTTGAATGGGAGAAGAAACTTGACTCATTTTGGCAGGGAAGGCTGAATGGTCAGGATCCCTTGGAAGTAATGACTGCCAAGGAGAAGATAGATGCTGCAGCAGCTGAAGTGTTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGTACAAACATCTGAAGCTAAAACACCCAGAGCTTGTTATTGATCAAACTTCAAAACTACGTGAGGATCTCTATTTTCAAAATTACATGAATGATCCAGATTCTCCTGGTGCAACGCCTGTCATGCAGCAACCTCAGAAGGACAGGCCTTTAAAACGAAGATTAGGTCTTGAGGGTCGATTGAGAGATGATCGTGGTAATCGGCGAGATCATGATCGGAGTGACAGAATAAACGATGGAGATAGGACTGAGAATTCCCCATCTCGTGAAAGGCATTCTAAAGCACTTGAGATGGGAAACCATGATGAAACAATGTATGACACTTATGCAGGGCCAGGTGTACCTCCATTTGCCTCAGATATGCCCCCTCCTCCACCAGTGTTGATGCCTGTACCTGGTGCTGGGCCTTTAGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGCTAAGAGAGCAAGGAGGACCATCTTCATATGAGGCCTCTGGAAGAAAGATGCGGTCAGGTCCTCATATGGGTGGACCAGCACCAATAATTGCTGTTCCTCCAGCTTTTAGACCAGATCCTCGGCGTATGCGAAGTTATCAAGATCTGGATGCCCCAGAGGACGAGGTCACTGTGATAGATTATCGGAGTTTGTAG	2235	0.4787	MAEVINMPPDSLDKSPSSSAPPPPPPPPPLPSSSAVDDDLPPPPHSSFRRRDRDSRDRRDDRDYDRPPNRRGGGGADYYDRDRNMSPPPPPPRDRDRDRDFKRRRSPSPSHRDRRYSPALRRSPPPYKRPRRGSPRGGYGPDDSRLGYDYYGGYDRGVGGRLGYVDEKSYGRFGHRSAGGYQNGISDMEPNRGYSDLPSGGAQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKQAYFNAHKDEEWLKDKYHPTNLLTVIERRNESARQLAKDFLLDLQSGTLDLNPGLNTSSSSKSGQASEPNSEEEPDTGGKRRRHGRGSNKENDFSAAPKSHPISSEPRRIQADIQQAQALVRKLDLEKGIEDNILSSSDHSKNDDKTHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETSEAKGFRHVRAEGTGHEEKGKSGFEWEKKLDSFWQGRLNGQDPLEVMTAKEKIDAAAAEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELVIDQTSKLREDLYFQNYMNDPDSPGATPVMQQPQKDRPLKRRLGLEGRLRDDRGNRRDHDRSDRINDGDRTENSPSRERHSKALEMGNHDETMYDTYAGPGVPPFASDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSYEASGRKMRSGPHMGGPAPIIAVPPAFRPDPRRMRSYQDLDAPEDEVTVIDYRSL	744

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi4294g00005	744	MobiDBLite	consensus disorder prediction	87	119	-	-
	Gabi4294g00005	744	MobiDBLite	consensus disorder prediction	576	629	-	-
	Gabi4294g00005	744	MobiDBLite	consensus disorder prediction	43	78	-	-
	Gabi4294g00005	744	MobiDBLite	consensus disorder prediction	1	150	-	-
	Gabi4294g00005	744	MobiDBLite	consensus disorder prediction	684	729	-	-
	Gabi4294g00005	744	PANTHER	ARSENITE-RESISTANCE PROTEIN 2	50	742	IPR039727	GO:0006397
	Gabi4294g00005	744	Pfam	SERRATE/Ars2, N-terminal domain	211	293	IPR021933	-
	Gabi4294g00005	744	MobiDBLite	consensus disorder prediction	557	629	-	-
	Gabi4294g00005	744	MobiDBLite	consensus disorder prediction	315	332	-	-
	Gabi4294g00005	744	ProSitePatterns	Zinc finger C2H2 type domain signature.	515	538	IPR013087	-
	Gabi4294g00005	744	Pfam	Arsenite-resistance protein 2	459	642	IPR007042	-
	Gabi4294g00005	744	MobiDBLite	consensus disorder prediction	292	314	-	-
	Gabi4294g00005	744	MobiDBLite	consensus disorder prediction	15	38	-	-
	Gabi4294g00005	744	MobiDBLite	consensus disorder prediction	292	351	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi4294g00005	Gabi-Chr4294	63009	75755	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi4294g00005	67	744	C2H2 Transcription Factor Family	AT2G27100	62.678	0.0	759