Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi428g00003 ATGACAATGAATCCACACCTTCTGGGATTTACTGGTTCAACAAATGAAGACCGTTTGGGTAATCAATCTTTGCCAATTCTGCAGAATCAGAGATTTGCTACTGGACCCAGATTTGGAAATGCTTTATTTGATCAGAATAGGGGATTTGATTATCTTCAGTCTGATCCAATACCTGCTAGTACACCTTCATCCTCTACTCTGACCCATGAGGAGCATTCTCCAGAGGATTGTGATTTTTCTGATGCAATTTTGAGTTACATCAGTCAGATCCTTATGGAAGAAGACATGGAAGACAAGACATGCATGCTTCAAGAATCTTTAGATCTTCAAGCAGCTGAGAAACCGTTCTATGAGGTGCTGGGTGAAAAGTATCCACCCTCACCCATAGGAAACCCTAGTCTTATCAATCAAAATGATGGGGTTGGAGATAATAATTTCTCTGGAAATTATGGTAATTGTCCTGGTACTAATGGTTATCTGAATAGCATTTTTACAGATAATTTCTTGCTCCCAAACTCAGTTGACTTTCCTCCAGAAAGTGTTCAAGGTAATAATAGCATTTCGCAGTCATCTTATAGCACTTCCAATAGTGCAATTAGTAGTGTGGAAGGGCATTTAGACTCTCCAGACAGTATTCTTCAGGTCCCTGATCTGAGCAGTGAGAGTCAATCCATTTGGCAATTTCAGAAGGGTGTTGAGGAGGCTAGTAAGTTTCTTCCGAGTGGAAATGGGCTGTTTGCTAATTTGTTATCGATACAGCCAAAAGTGGAAATGGATCAATTGTCAGTTAAGGTGGAGAAGGATGAGAGGGAATGTGTTCTTGGTGGATCCAAGGGAAGGAAGCACCCTCACAGAGAAGAGGGAGATGTTGAAGAAAATAGAAGCAGTGATGGTAAAGAGCATTATGTGGCTCGTCGTGAGGCTTTGCAGAATAAGACAAACAAGACAGCATTGCCTAATGGTCAATCAAAAGCTTCCAATAGAGGGAAGGGACGAGGTAAGAAACAAAGTGGGAAAAAGGAGGTGATCGATTTGAGAACACTTCTGGTCCTTTGTGCTCAAGCTGTTGCAGCAGATGACTATAGGAATGCGCATGAGTTGCTAAAGCAGATCAGGCAGCACTCAAGCCCTTTTGGAGATGGAAATCAGAGGTTGGCTCATATCTTTGCAGATGGTCTTGAGGCGCGCTTGGCTGGTACTGGAAGCCAAATTTATAAGGGACTTGTTAGTAAAAGAACAACAGCTGCTGATGTTCTAAAAGCTTATCATCTATACCTTGCTGCCTGCCCTTTTAGGAAAATTTCTAATTTCACCTCAAACGTCACAATAAGGACAGCTTCTGCAAATTCAATGAGGGTCCATGTTATAGATTTTGGTATCCTTTATGGTTTTCAGTGGCCCACCTTTATACAGCGACTTTCATGGAGAACAGGAGGGCCACCAAAGCTTCGGATTACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCCGCAGAGAGAATTATAGAAACAGGACGCCGTTTGGCAGCTTATGCTGATTCCTTTAAGGTTCCATTTGAGTATAATGCCATAGCAAAGAAATGGGAAACAATTAAACTTGAAGAACTCAAGATTGATAGGGATGAGTTCCTTGTTGTCACTTGTTTATATAGAGGTAAGAACTTGCTGGATGAATCTGTTGTAGTGGACAGTCCAAGGAATAATTTCCTCAGTTTGATAAGAAAGATCAACCCAAATATATTCATTCACGGCATTATGAATGGGGCGTTCAATGCCCCTTTCTTTGTTACCCGATTCCGGGAGGCACTCTTTCACTATTCATCACTTTTTGATATGCTTGAATCTATTGTGCCTCGGGAGGAGTGGGAGAGGATGCTAATTGAGAAAGAGATATTTGGAAGGGAAGCACTGAATGTTATAGCTTGTGAAGGCTGTGAAAGAGTAGAGAGGCCAGAGACATATAAACAGTGGCAAGCACGAATTATACGGGCTGGGTTTCTGCAACAACCTCTTGATCGTGAGACAGTGAAGTTGGCAATGGAGAAAGTAAGAACTGGCTACCACAAGGATTTTGTAATTGATGAAGATAGGCCATGGTTATTGCAAGGTTGGAAGGGGCGTATCATTTATGCCCTTTCTTGTTGGAGACCTGCATAA 2157 0.42 MTMNPHLLGFTGSTNEDRLGNQSLPILQNQRFATGPRFGNALFDQNRGFDYLQSDPIPASTPSSSTLTHEEHSPEDCDFSDAILSYISQILMEEDMEDKTCMLQESLDLQAAEKPFYEVLGEKYPPSPIGNPSLINQNDGVGDNNFSGNYGNCPGTNGYLNSIFTDNFLLPNSVDFPPESVQGNNSISQSSYSTSNSAISSVEGHLDSPDSILQVPDLSSESQSIWQFQKGVEEASKFLPSGNGLFANLLSIQPKVEMDQLSVKVEKDERECVLGGSKGRKHPHREEGDVEENRSSDGKEHYVARREALQNKTNKTALPNGQSKASNRGKGRGKKQSGKKEVIDLRTLLVLCAQAVAADDYRNAHELLKQIRQHSSPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRTTAADVLKAYHLYLAACPFRKISNFTSNVTIRTASANSMRVHVIDFGILYGFQWPTFIQRLSWRTGGPPKLRITGIDFPQPGFRPAERIIETGRRLAAYADSFKVPFEYNAIAKKWETIKLEELKIDRDEFLVVTCLYRGKNLLDESVVVDSPRNNFLSLIRKINPNIFIHGIMNGAFNAPFFVTRFREALFHYSSLFDMLESIVPREEWERMLIEKEIFGREALNVIACEGCERVERPETYKQWQARIIRAGFLQQPLDRETVKLAMEKVRTGYHKDFVIDEDRPWLLQGWKGRIIYALSCWRPA 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi428g00003 718 MobiDBLite consensus disorder prediction 52 75 - -
Gabi428g00003 718 ProSiteProfiles GRAS family profile. 336 716 IPR005202 -
Gabi428g00003 718 MobiDBLite consensus disorder prediction 1 20 - -
Gabi428g00003 718 MobiDBLite consensus disorder prediction 272 308 - -
Gabi428g00003 718 MobiDBLite consensus disorder prediction 272 339 - -
Gabi428g00003 718 Pfam GRAS domain family 345 716 IPR005202 -
Gabi428g00003 718 MobiDBLite consensus disorder prediction 309 327 - -
Gabi428g00003 718 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 273 710 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi428g00003 Gabi-Chr428 17907 21345 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi428g00003 48 717 GRAS Transcription Factor Family AT2G37650 52.514 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi428g00003 GRAS 1.2e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi428g00003 - - gmx:100780785 1115.91