Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi428g00002 ATGGAAGAAGACATGGAAGACAAGACATGCATGCTTCAAGAATCTTTAGATCTTCAAGCAGCTGAGAAACCGTTCTATGAGGTGCTGGGTGAAAAGTATCCACCCTCACCCATAGGAAACCCTAGTCTTATCAATCAAAATGATGGGGTTGGAGATAATAATTTCTCTGGAAATTATGGTAATTGTCCTGGTACTAATGGTTATCTGAATAGCATTTTTACAGATAATTTCTTGCTCCCAAACTCAGTTGACTTTCCTCCAGAAAGTGTTCAAGGTAATAATAGCATTTCGCAGTCATCTTATAGCACTTCCAATAGTGCAATTAGTAGTGTGGAAGGGCATTTAGACTCTCCAGACAGTATTCTTCAGGTCCCTGATCTGAGCAGTGAGAGTCAATCCATTTGGCAATTTCAGAAGGGTGTTGAGGAGGCTAGTAAGTTTCTTCCGAGTGGAAATGGGCTGTTTGCTAATTTGTTATCGATACAGCCAAAAGTGGAAATGGATCAATTGTCAGTTAAGGTGGAGAAGGATGAGAGGGAATGTGTTCTTGGTGGATCCAAGGGAAGGAAGCACCCTCACAGAGAAGAGGGAGATGTTGAAGAAAATAGAAGCAGTAAGCAAGCAGCAATTTATTCCGAACCGACATTGCGATCAAATATGACTGATATATTCCTGCTTCATAGCGCAGGTGATGGTAAAGAGCATTATGTGGCTCGTCGTGAGGCTTTGCAGAATAAGACAAACAAGACAGCATTGCCTAATGGTCAATCAAAAGCTTCCAATAGAGGGAAGGGACGAGGTAAGAAACAAAGTGGGAAAAAGGAGGTGATCGATTTGAGAACACTTCTGGTCCTTTGTGCTCAAGCTGTTGCAGCAGATGACTATAGGAATGCGCATGAGTTGCTAAAGCAGATCAGGCAGCACTCAAGCCCTTTTGGAGATGGAAATCAGAGGTTGGCTCATATCTTTGCAGATGGTCTTGAGGCGCGCTTGGCTGGTACTGGAAGCCAAATTTATAAGGGACTTGTTAGTAAAAGAACAACAGCTGCTGATGTTCTAAAAGCTTATCATCTATACCTTGCTGCCTGCCCTTTTAGGAAAATTTCTAATTTCACCTCAAACGTCACAATAAGGACAGCTTCTGCAAATTCAATGAGGGTCCATGTTATAGATTTTGGTATCCTTTATGGTTTTCAGTGGCCCACCTTTATACAGCGACTTTCATGGAGAACAGGAGGGCCACCAAAGCTTCGGATTACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCCGCAGAGAGAATTATAGAAACAGGACGCCGTTTGGCAGCTTATGCTGATTCCTTTAAGGTTCCATTTGAGTATAATGCCATAGCAAAGAAATGGGAAACAATTAAACTTGAAGAACTCAAGATTGATAGGGATGAGTTCCTTGTTGTCACTTGTTTATATAGAGGTAAGAACTTGCTGGATGAATCTGTTGTAGTGGACAGTCCAAGGAATAATTTCCTCAGTTTGATAAGAAAGATCAACCCAAATATATTCATTCACGGCATTATGAATGGGGCGTTCAATGCCCCTTTCTTTGTTACCCGATTCCGGGAGGCACTCTTTCACTATTCATCACTTTTTGATATGCTTGAATCTATTGTGCCTCGGGAGGAGTGGGAGAGGATGCTAATTGAGAAAGAGATATTTGGAAGGGAAGCACTGAATGTTATAGCTTGTGAAGGCTGTGAAAGAGTAGAGAGGCCAGAGACATATAAACAGTGGCAAGCACGAATTATACGGGCTGGGTTTCTGCAACAACCTCTTGATCGTGAGACAGTGAAGTTGGCAATGGAGAAAGTAAGAACTGGCTACCACAAGGATTTTGTAATTGATGAAGATAGGCCATGGTTATTGCAAGGTTGGAAGGGGCGTATCATTTATGCCCTTTCTTGTTGGAGACCTGCATAA 1959 0.4227 MEEDMEDKTCMLQESLDLQAAEKPFYEVLGEKYPPSPIGNPSLINQNDGVGDNNFSGNYGNCPGTNGYLNSIFTDNFLLPNSVDFPPESVQGNNSISQSSYSTSNSAISSVEGHLDSPDSILQVPDLSSESQSIWQFQKGVEEASKFLPSGNGLFANLLSIQPKVEMDQLSVKVEKDERECVLGGSKGRKHPHREEGDVEENRSSKQAAIYSEPTLRSNMTDIFLLHSAGDGKEHYVARREALQNKTNKTALPNGQSKASNRGKGRGKKQSGKKEVIDLRTLLVLCAQAVAADDYRNAHELLKQIRQHSSPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRTTAADVLKAYHLYLAACPFRKISNFTSNVTIRTASANSMRVHVIDFGILYGFQWPTFIQRLSWRTGGPPKLRITGIDFPQPGFRPAERIIETGRRLAAYADSFKVPFEYNAIAKKWETIKLEELKIDRDEFLVVTCLYRGKNLLDESVVVDSPRNNFLSLIRKINPNIFIHGIMNGAFNAPFFVTRFREALFHYSSLFDMLESIVPREEWERMLIEKEIFGREALNVIACEGCERVERPETYKQWQARIIRAGFLQQPLDRETVKLAMEKVRTGYHKDFVIDEDRPWLLQGWKGRIIYALSCWRPA 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi428g00002 652 MobiDBLite consensus disorder prediction 182 203 - -
Gabi428g00002 652 ProSiteProfiles GRAS family profile. 270 650 IPR005202 -
Gabi428g00002 652 Pfam GRAS domain family 279 650 IPR005202 -
Gabi428g00002 652 MobiDBLite consensus disorder prediction 244 273 - -
Gabi428g00002 652 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 211 644 IPR005202 -
Gabi428g00002 652 MobiDBLite consensus disorder prediction 182 206 - -
Gabi428g00002 652 MobiDBLite consensus disorder prediction 244 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi428g00002 Gabi-Chr428 17907 21345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi428g00002 2 651 GRAS Transcription Factor Family AT2G37650 54.669 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi428g00002 GRAS 9.4e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi428g00002 - - gmx:100780785 1040.8