Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4285g00006 ATGCTAGGGAAAAAGATGGTATCATTGAAGAAACTAGCCAAAAAGGTGAAGGCTGTTGGTGGAGCTGACCCTGATCCTCCCTACAATGAATATTTGCTCAAGGGGTATGTGGAAGAATCCCCATCAAGCACAACCCCAAATGGTTTTTTTGCACTTTATGTTGGGGAGGAGCGTCAGAGGTATGTGGTTCCAACCAGTTACCTTTCTCACCCTTTATTCAAGATGTTGTTGGAGAAGGCTTACAGTGAATTTGGGTTTGCACAGAGGAATGGCCTGGTAGTTCCATGCAGTGTTTCCACATTTCAGGAGGTTGTAAATGCTATAGAATGTAACAATGGCAAGTTTGACTTGGGCAAAATTTTTGAAGATTTTGTTTAA 378 0.4206 MLGKKMVSLKKLAKKVKAVGGADPDPPYNEYLLKGYVEESPSSTTPNGFFALYVGEERQRYVVPTSYLSHPLFKMLLEKAYSEFGFAQRNGLVVPCSVSTFQEVVNAIECNNGKFDLGKIFEDFV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4285g00006 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 104 IPR003676 GO:0009733
Gabi4285g00006 125 Pfam Auxin responsive protein 38 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4285g00006 Gabi-Chr4285 63806 64183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4285g00006 41 111 Calmodulin-binding Proteins AT5G20810 52.113 2.15e-21 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4285g00006 K14488 - gmx:100790208 208.379