Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4282g00069 ATGGAAACATCAGTCAATAACGGTCATTCAAATGGGGACTGCAATTTCCTTGCTCAGCCCATGTATAAGCGGCGGAAAGTTTCTGCTATTCGTGATTTCCCAGAACAATGTGGACCACTTGCTTCAAGGATTGATCCAGTGTTAAAGGTAGATAGTGCTGGTTTTGGTTCTGCTAATGGTACAGTTGTTGAGGATAAGAATGGTGAACATTTAGGGGGTGAAGCTGCTGGAACTTCCAAGTATGAAGATGATTCTCGGCATTCTGAGTTTGAAAAGGATTCGTTTCTTACTGAGACTCTTGGCCAAACAATTGAATCTAGTTTGAAGAAGGAAAGTTCTGTGGCCTCATCTCATCACACGGATGGGCCTACATTGGGAAATGATGAACCTGCAGAAGTGAAGTTGTTGGACATAGAAGCTTTGGATACAACTGTGAACTCTGTAAAATGTGACTCCTCTTATATGTCAAAGTCATCTTCTCCGGTGGGTGAGGCGGCTTTGTCAAGTTTTTCAAATTCCTTATCATCCGATGTCAATATAGATGGTTCCAGTGCTTATTTGGTGGAGGCTGTAACTAGAAGGTATCTTCCTCGAAGAAAAGTTTCGGTTCTCAGAGACTTTCCTCCTTTTTGTGGACGCGATGCTCCATCTCTAAGTAAGGATGAGCCTCTAAAGAGGATCTCTTCATTGAGTAACAAGAGAGCTCGTCAACAGGACTTGGCTGTAGATGACAATCCGTTGAAAAAAGTAGCAGTCACTGATGTGAAAGAAGTGGAAGATAACATTCAAGATGAGTGTGGTTCTAAGGGAAAGTTTGTGGACATCGTTCAAGCTGATTCTGAAGGGAATGCTACAGGGAGAGTGAAGAAGCTGGATGTATTTGAACCATCTTCTGGGATTAAACTGGAAAAAACAAAAGAAAAGTACATTGCGCATTTTGAAAAAAGTAATCGTCATCAGGTTGAAATAAAATCCAAGGCAGTGGTTAAAGATGAAGTCCAAAGACCTGAGACAAAACCTTTGAATGTGTCAAGTAGTAAGCATGAGTTGAAAAGAGAGCTCAAAGGATTGCAGATCTCATCAGACAGGAAAGTAGTGCTGGGTTTGATGGCAAAATCAGAATGTCCTTTGAGTTCTGATAAAGGTTCCTCCAAATTTAAATTGATTGGTGGTACGGATGAAAGCAAGGGAAAGAAAGTTGGTGTTAATGCACGGCCTGACAGGTCTAAGGTTGCTATCAAGACTAAAGACGGACTGAATCATTCTGGGCAGAAGCCTTTGAAAAAGAAAAAAGAAGATGCTGCTTCTGACGGTATGGGTCAACTAGAAATTTGGGAAAAGAAGGATTCTCTTCATTCTGAGCAGAAGCCTTTGAAAAAGGAAAAAGGAAATGCTGCTTCTGATGGTATGGGTCAATTAGTAATTTGGGAAAAGAAGGATTCTCTTGACCCTAATGAAAATATTGAAGACTTTCAGGTTGCCCGGAAATCACATGGTCACCATGTAACTATTCCTCCTCATAATTTCAGTGGACATGACAATGACTCAAATGTGACCCGTAATAAAGTGAGGGAAACATTACGCCTGTATCAAGCTGTTTCTAGAAAGCTTTTGCAGGAAGTTGAAGCAAAACCAAAAGACCGAGAAAATACTCCCAAGAGGATTGATTTACAAGCGGCAAAGATCCTTAAGGGGAAAGAGAAATATATTAACACAGGCAAGCAGATCTTGGGATCTGTCCCTGGAGTTGAAGTTGGTGATGAATTTCAATATAGGGTGGAGCTTAATATAATTGGCCTTCATCGCCAGACTCAGGGTGGCATAGATTATGTGAAGCACAATGGTAAGATCCTAGCAACTAGTATTGTTGCATCCGGGGGCTATGCTGATGAGTTGGATAATTCGGATGTCTTGATATATACAGGGCAGGGTGGGAATGTGATGAACACCGATAAAGCACCTGTAGATCAGAAGCTTGAGCGGGGCAATCTTGCTTTGAAGAACAGTAGCGAGGAAAAAAATCCTGTTAGGGTGATACGAGGGTATGAATCAATGGATGGAAATGGTAAGACATATGTTTATGATGGACTCTATCTAGTTGATTCATGTTGGCAGGATATGGGGCCACACGGGAAGCTGGTTTATAAGTTTCGCTTGCGAAGAATCCCAGGTCAACCAGAGCTTGCTTTGAAGGAAGTGAAGAAATCTAAAAAGTTCAAAACAAGAGAAGGCCTATGTGTTGATGATATTTCTTATGGGAAAGAGCGAATTCCCATATGTGCTGTGAACACCATAGATGATGAAAAACCCCCAACATTTAAATACATAACTAGCATGATATATCCTGATTGCGATCTCATTCCTCCGGAAGGATGTGGTTGTATTGATGGATGCTCTGACTTAAAGAAATGTTCTTGTGTAGTAAAAAATGGGGGAGAGATCCCTTTCAATCATAATGGGGCAATTGTAGAGGCAAAGCCTCTAGTCTATGAGTGTGGACCTTCTTGCAAGTGCCCTTCAACATGCTACAATAGAGTCAGCCAACTTGGTATAAAGTTTCAACTTGAAATTTTTAAAACCAATTCAAGGGGATGGGGTGTGAGATCCCTAAATTCCATCCCTTCAGGAAGTTTTATCTGCGAATATTTAGGAGAGCTTCTTGAAGAAAAGGAAGCCGAACAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACTTCACCAACAGTACTCTTTGGGATGGACTTTCGACCCTTATGCCTGATACACAGTCAAGTTCTTGTGAAGTTGTGAAGGAGGGTAGCTTCACCATTGATGCCGCCCAGTTTGGTAACGTGGGGAGATTCATCAACCATAGTTGCTCCCCTAATCTTTATGCTCAGAATGTCCTTTTTGATCATCATGACAATAGGATTCCTCACATTATGCTCTTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGTTGTCTTACGATTACAATTATACGATAGATCAAGTCCGTGATTCTAGTGGCAATATAAAAAAGAAGGCTTGCTATTGTGGTTCTGTGGATTGTACAGGTAGGATGTATTGA 3081 0.4109 METSVNNGHSNGDCNFLAQPMYKRRKVSAIRDFPEQCGPLASRIDPVLKVDSAGFGSANGTVVEDKNGEHLGGEAAGTSKYEDDSRHSEFEKDSFLTETLGQTIESSLKKESSVASSHHTDGPTLGNDEPAEVKLLDIEALDTTVNSVKCDSSYMSKSSSPVGEAALSSFSNSLSSDVNIDGSSAYLVEAVTRRYLPRRKVSVLRDFPPFCGRDAPSLSKDEPLKRISSLSNKRARQQDLAVDDNPLKKVAVTDVKEVEDNIQDECGSKGKFVDIVQADSEGNATGRVKKLDVFEPSSGIKLEKTKEKYIAHFEKSNRHQVEIKSKAVVKDEVQRPETKPLNVSSSKHELKRELKGLQISSDRKVVLGLMAKSECPLSSDKGSSKFKLIGGTDESKGKKVGVNARPDRSKVAIKTKDGLNHSGQKPLKKKKEDAASDGMGQLEIWEKKDSLHSEQKPLKKEKGNAASDGMGQLVIWEKKDSLDPNENIEDFQVARKSHGHHVTIPPHNFSGHDNDSNVTRNKVRETLRLYQAVSRKLLQEVEAKPKDRENTPKRIDLQAAKILKGKEKYINTGKQILGSVPGVEVGDEFQYRVELNIIGLHRQTQGGIDYVKHNGKILATSIVASGGYADELDNSDVLIYTGQGGNVMNTDKAPVDQKLERGNLALKNSSEEKNPVRVIRGYESMDGNGKTYVYDGLYLVDSCWQDMGPHGKLVYKFRLRRIPGQPELALKEVKKSKKFKTREGLCVDDISYGKERIPICAVNTIDDEKPPTFKYITSMIYPDCDLIPPEGCGCIDGCSDLKKCSCVVKNGGEIPFNHNGAIVEAKPLVYECGPSCKCPSTCYNRVSQLGIKFQLEIFKTNSRGWGVRSLNSIPSGSFICEYLGELLEEKEAEQRTGNDEYLFDIGNNFTNSTLWDGLSTLMPDTQSSSCEVVKEGSFTIDAAQFGNVGRFINHSCSPNLYAQNVLFDHHDNRIPHIMLFAAENIPPLQELSYDYNYTIDQVRDSSGNIKKKACYCGSVDCTGRMY 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4282g00069 1026 MobiDBLite consensus disorder prediction 447 463 - -
Gabi4282g00069 1026 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 361 1026 IPR025794 GO:0016571
Gabi4282g00069 1026 MobiDBLite consensus disorder prediction 106 123 - -
Gabi4282g00069 1026 Pfam SET domain 864 996 IPR001214 GO:0005515
Gabi4282g00069 1026 Pfam SAD/SRA domain 577 725 IPR003105 -
Gabi4282g00069 1026 SMART G9a_1 573 725 IPR003105 -
Gabi4282g00069 1026 SUPERFAMILY PUA domain-like 559 734 IPR015947 -
Gabi4282g00069 1026 Gene3D - 559 741 IPR036987 -
Gabi4282g00069 1026 CDD SET_AtSUVH-like 773 997 - -
Gabi4282g00069 1026 MobiDBLite consensus disorder prediction 67 90 - -
Gabi4282g00069 1026 ProSiteProfiles YDG domain profile. 578 721 IPR003105 -
Gabi4282g00069 1026 ProSiteProfiles SET domain profile. 853 996 IPR001214 GO:0005515
Gabi4282g00069 1026 MobiDBLite consensus disorder prediction 447 466 - -
Gabi4282g00069 1026 SMART preset_2 747 837 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Gabi4282g00069 1026 Gene3D SET domain 742 1026 IPR046341 -
Gabi4282g00069 1026 SUPERFAMILY SET domain 737 1002 IPR046341 -
Gabi4282g00069 1026 SMART set_7 853 1002 IPR001214 GO:0005515
Gabi4282g00069 1026 Pfam Pre-SET motif 750 845 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Gabi4282g00069 1026 MobiDBLite consensus disorder prediction 106 129 - -
Gabi4282g00069 1026 MobiDBLite consensus disorder prediction 414 436 - -
Gabi4282g00069 1026 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 356 1019 - -
Gabi4282g00069 1026 ProSiteProfiles Pre-SET domain profile. 790 850 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Gabi4282g00069 1026 ProSiteProfiles Post-SET domain profile. 1010 1026 IPR003616 -
Gabi4282g00069 1026 MobiDBLite consensus disorder prediction 64 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4282g00069 Gabi-Chr4282 703709 707627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4282g00069 517 1023 Su(var)3-9 homologs AT5G04940 40.952 2.41e-118 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi4282g00069 SAD_SRA 3.7e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4282g00069 K11420 - gmx:100803378 1239.56