Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4282g00064 ATGATTTCTTCCAAGTTTTGCAGTGTAAATAAGCCTGTGACTAAGGAGCCAAAAGGTGCACAGTTGACAATCTTTTATGGTGGCCAAGTTATTGTCTTTGAAGATTTTCCAGCTCACAAAGCCAAGGAGATCATGTCCTTTGAAAGCAAAGATATCTCTAAAAGCCAGGATAACTATGGTTATGCATTCTCTCAAAGCCAACCCTCATTTCATGCTAATACAGTCAGAAGTTCTGGTAGTTCCAGTAGTTTATTTCCTTTTCCTATGAATATGAACCCTAGCACTGGCAACAGTTCCGTTCAAGAGCATCCTCAAGCACCGTCCAGACATGTTGTTTGTGATCTACCAATTGCAAGGAAAGCTTCACTACATCGGTTCTTGGAGAAAAGAAAGGATAGAATCGCTGCAAAAGCGCCATATCAAATAAGCAATCACATGGCAGCACTTAATAAGGCAGCTGAATCCATGTCATGGCTCGCCTTGGCACCTAAATCACCACAAGACAAATCTGAAAGTAGCTCCAGCGTTGTGTTATTTTGA 540 0.413 MISSKFCSVNKPVTKEPKGAQLTIFYGGQVIVFEDFPAHKAKEIMSFESKDISKSQDNYGYAFSQSQPSFHANTVRSSGSSSSLFPFPMNMNPSTGNSSVQEHPQAPSRHVVCDLPIARKASLHRFLEKRKDRIAAKAPYQISNHMAALNKAAESMSWLALAPKSPQDKSESSSSVVLF 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4282g00064 179 SMART tify_2 15 50 IPR010399 -
Gabi4282g00064 179 Pfam tify domain 16 46 IPR010399 -
Gabi4282g00064 179 ProSiteProfiles Tify domain profile. 15 50 IPR010399 -
Gabi4282g00064 179 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 14 155 IPR040390 -
Gabi4282g00064 179 Pfam Jas motif 116 141 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4282g00064 Gabi-Chr4282 654933 656029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4282g00064 5 162 Tify Gene Family AT1G19180 38.750 5.87e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi4282g00064 tify 1.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4282g00064 K13464 - gmx:100306332 194.126