Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4282g00062 ATGGAGAAACGGTATGAGCCATTGAAGGATATTGGTTCGGGTAATTTTGGTGTGGCTAAGTTGGTCAAAGACAAGAAGACAGGGGAGCTTGTTGCTGTCAAATACATAGAAAGGGGAACTAAGATTGATAAGAAGGTTCAAAGGGAGATAATTAACCACCGATGTTTAAGGCATCCAAATATTATCGGGTTCAGAGAGGTATTTCTGACCCCTACTCATTTAGCTATTGTCATGGAGTATGCTGGTGGTGGTGAACTCTTTGATAGGGTTAATGATGCTGGTCGAATAAGTGAAGATGAGGCAAGATTTTTCTTTCTGCAACTAATATGTGGAGTTAGCTACTGTCATTCCATGCAAATTTGTCATAGAGATTTGAAATTGGAAAACATTCTCTTGGACGGAAATCCAGCTCCTCAACTTAAAATTTGTGACTTTGGTTTCTCCAAGTCCGCTTTTCTGCACTCTCGACCTAAATCAACAATTGGAACTCCTGCATACATTGCTCCAGAGGTTTTTTTGCGAAAGGAGTATGATGGAAAGCTTGCAGATGTTTGGTCTTGTGGTGTGTCTCTTTATGTCATGTTATTTGGAGCGTACCCATTTGCAGACCCAGGAGAAGCTAACAATATAAGAAAGAGTATTGAGAGAATAATGAGTGTTCAGTACTCCATACCGGACAGCATACGTGTTTCTGCAGAGTGTAGGCATCTCCTCTCTCGTATTTTTGTTGCCAATCCTGCCATGAGAATCACCGTCACCGAGATAAAACAGCATCCTTGGCTTTCGAAGAAACTACCTAGACAGAAATTTGAGGCTGAAATAAAAAAAGATTACAAGGAAACATGGAAAGACCAACCAAGACAAAGTGTGGAAGAAATCATGCGGATCATACAAGAGGCAAGGATACCCGGGCCAGGATCCAAAGCTGTGGATGTTGAAGAGGCTGGCGAGGAAGTTGATGCTAGTGGCTATTATGCGAAACCTTTGTGA 990 0.4172 MEKRYEPLKDIGSGNFGVAKLVKDKKTGELVAVKYIERGTKIDKKVQREIINHRCLRHPNIIGFREVFLTPTHLAIVMEYAGGGELFDRVNDAGRISEDEARFFFLQLICGVSYCHSMQICHRDLKLENILLDGNPAPQLKICDFGFSKSAFLHSRPKSTIGTPAYIAPEVFLRKEYDGKLADVWSCGVSLYVMLFGAYPFADPGEANNIRKSIERIMSVQYSIPDSIRVSAECRHLLSRIFVANPAMRITVTEIKQHPWLSKKLPRQKFEAEIKKDYKETWKDQPRQSVEEIMRIIQEARIPGPGSKAVDVEEAGEEVDASGYYAKPL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4282g00062 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Gabi4282g00062 329 FunFam Serine/threonine-protein kinase SRK2A 81 269 - -
Gabi4282g00062 329 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4282g00062 329 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4282g00062 329 PANTHER SERINE/THREONINE KINASE 3 280 - -
Gabi4282g00062 329 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Gabi4282g00062 329 SUPERFAMILY Protein kinase-like (PK-like) 3 271 IPR011009 -
Gabi4282g00062 329 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Gabi4282g00062 329 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Gabi4282g00062 329 Gene3D Transferase(Phosphotransferase) domain 1 82 268 - -
Gabi4282g00062 329 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4282g00062 Gabi-Chr4282 636295 639444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4282g00062 4 263 CBL-interacting serine-threonine protein kinases AT4G24400 41.697 3.29e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gabi4282g00062 Pkinase 1.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4282g00062 K14498 - gmx:547790 496.893