Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4282g00013 ATGGATGTAGGATGTGGTACCAGCCAAGCTCCAGTAGGATGTGGTGGCCGTGATATTGACAGGGCTGCAATAGGAGGTCGTGGTCATGGTACCCGCTGGGCTCCGGTAAGAGGTCGTGGTCATGGTACCCGCTGGGCTCCGGTAAGAGGTCGTGGTCATGGTACTAATAGGGCTCCGGTAAGACGTGGTACCAGCTGGGCTCCGGTAAGAGTTGGTGGCCATGATATCAGCCGGGCTACTATAGGAGGTGGAGGCCGTGGTACCAGCTGGGCTCCGGTAAGAGGTCATGGCCGTGGTACCAGCTGGGCTCCGGTAAGAGGTGGTGGTCATGGTACCCGCTGGGCTCCGGTAAGAGGTCATGGTCATGGTACTGATAGGGCTCCGGTAGGACGTGGTACCGGCTGGGCTCCGGTAAGAGGTGGTGGTCGTGGTATCAGCTGGGCTTCTATAGGAGGTGGTGGTGGTGGTACCAGCTGGGCTCCGGTAAGAGGTGGTGGTCGTGGTATCAGCCGGGCTACTATAGGAGGTGGTGGTACCAGTTGGGCTCCGATAAGAGGTCGTGGTCATGGTACCAGCTGGGCTCCGGTAAGAGGTAGTGGTGGTGGTACCGACAGCGCTGCAGTAGGAGGTGGTGGCCATGATATTGATAGTGCTCCGGTAGAAGGTGGTACCGACACGGCTGCATCAAGAGGTGGTGTCAATGATACTGACAGGGCTACTCTAGGAGTTGTTGGCAATGATCCTGACAGGGCTTTGGCAGGAGGTGGTGGTGGTGGTACCGACAGCGCTGCAGTAGGAGGTGGTGGCCATGATATTGATAGTGCTTCGGTAGGTGTTGGCCATGATATTGATAGGGCTCCGGTAGAAGGTGTTGGCCATGATATTGATAGTGCTCCGGTAGAAGGTGGTGGTACCAACAGGGCTACTCCAGGAGTTGGCAATGATCCTGACAGGGCTTCGGCAGGAGGTGGTGGCGTAATGTTCCTCAAGGGCACTCACAAACACAACACGTATGTAGATGCATTATATTTTGCAGTAGTAACTTTTAGCTCAGTTGGATACGGAGATCTTGTTCCTAACACCATATTGACCAAGATGTTAATGGAATGGATTGATAGTGTTTATTTGTCCATCATATCCATTTCAACCGTTGGATACGGTGATTTATCTTTTAGTACTGTAAAAGGAAGATGTTCTGCTTTAGTCTTGCTTTCGATAAGCACAAAGCGGATAATCTTATCAAGAGAATTGGTTGCTGCTGATGTGGATAAAGATGGATATATCAGTAAATTTAAATATATCTTATACAAGCTTCAACAAATGGGGAAGATAACCGAGCAAGACATTCATCTAATAGACCAGCTATTTAATTCATTGGATCCTCTCACAGATTTGGCAAGTTTAGACTTGCTACTCGTGCTACCCTCCTAG 1431 0.5094 MDVGCGTSQAPVGCGGRDIDRAAIGGRGHGTRWAPVRGRGHGTRWAPVRGRGHGTNRAPVRRGTSWAPVRVGGHDISRATIGGGGRGTSWAPVRGHGRGTSWAPVRGGGHGTRWAPVRGHGHGTDRAPVGRGTGWAPVRGGGRGISWASIGGGGGGTSWAPVRGGGRGISRATIGGGGTSWAPIRGRGHGTSWAPVRGSGGGTDSAAVGGGGHDIDSAPVEGGTDTAASRGGVNDTDRATLGVVGNDPDRALAGGGGGGTDSAAVGGGGHDIDSASVGVGHDIDRAPVEGVGHDIDSAPVEGGGTNRATPGVGNDPDRASAGGGGVMFLKGTHKHNTYVDALYFAVVTFSSVGYGDLVPNTILTKMLMEWIDSVYLSIISISTVGYGDLSFSTVKGRCSALVLLSISTKRIILSRELVAADVDKDGYISKFKYILYKLQQMGKITEQDIHLIDQLFNSLDPLTDLASLDLLLVLPS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4282g00013 476 MobiDBLite consensus disorder prediction 223 273 - -
Gabi4282g00013 476 Gene3D - 369 425 - -
Gabi4282g00013 476 Gene3D - 320 368 - -
Gabi4282g00013 476 SUPERFAMILY Voltage-gated potassium channels 368 406 - -
Gabi4282g00013 476 MobiDBLite consensus disorder prediction 295 317 - -
Gabi4282g00013 476 MobiDBLite consensus disorder prediction 25 61 - -
Gabi4282g00013 476 Pfam Ion channel 368 404 IPR013099 -
Gabi4282g00013 476 Pfam Ion channel 333 367 IPR013099 -
Gabi4282g00013 476 PANTHER CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN 325 368 - -
Gabi4282g00013 476 MobiDBLite consensus disorder prediction 75 140 - -
Gabi4282g00013 476 SUPERFAMILY Voltage-gated potassium channels 332 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4282g00013 Gabi-Chr4282 136564 138534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4282g00013 370 471 Ion Channels AT4G18160 35.878 4.88e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4282g00013 K05389 - cqd:128693646 127.487