Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4282g00011 | ATGGTTTGCACTGCCAATGAATTACAGGGATGGAAAGATTTTCCAAAAGGACTTAGGGTTCTTCTTCTTGAAGGAGACATCATTTCTGCTGCAGAGATAAGAGCAAAGCTCGAGGCCATGGACTATATTGTTTCTACCTTCTGCGATGAGAATGAAGCCTTGTCTGCAATCTCGAGTAATCCTGAAGGCTTTCATGTTGCCTTAGTGGAGGTGAGTACAAGCAGTAGCCAGGGAGGTTTCAAATTTCTAGAGAATGCGAAGGGCTTGCCAACCATTATGACTTCAAACAGTCAGTGCCTGAACACCATGATGAAGTGCATTGCGCTTGGTGCAGTTGAGTTCCTCACTAAACCAGTATCTGAGGACAAGCTCAAAAATATTTGGCAGCATGTGGTTCACAAGGCATTCAATGCTGGGGCAAGTATCCTGTCTGAATCATTAAAACCTGTCAAAGAATCCGTAAAATCCATGTTGCAGCTCCTAACAGACAAAGGACAACATGAAAGTACAATTTCAATAGATTTAGAGAATGTATCCAGGTTTAGTGATAATGTCCATGAGCAGTCTGCTGGAAGTGATAAATATCCAGCTCCTTCAACCCCACAATTAAAACAGGCGGCAAGGTTACTGGATGATGGGGATTGCCATGAGCAGACTAATTGTTCAACAGAAAAAGAAAGTGGGGAACATGATGGAGAATCTAAATCTGCCGAAACTTCATGTGAGAATTTGAACGCTGAAAGTTCTCTTCAACCAAGGAAACCTGAGAAGACTATGATTAAGGAGGAAGAGGATTTTGCCAATGTTTCCAAGGGTGAAAATGCTGTATCACTGAATCCACATAATAGAAAGTTCCTCAGCAACGCTGATGGCAATACATCTCCAAATAAAGGAGGTGTTCTTAATGAATCACGTGAGATTAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACGCCTGAGCTGCACAAAAAATTTGTAAAGGCAGTGGAACAGCTAGGTGTTGATCAAGCCATTCCTTCTCGAATATTGGAGCTAATGAAAGTGGACGGCTTGACAAGGCACAATGTGGCAAGCCATCTTCAGAAGTATAGAATGCACAAGAGACAAACGGTGCCCGGGGAAGAAGATCGAAAATGGCAAAATCAAAGAGATCCAACGCAAAGGAGCTATTGTATGCAAAGACCAATCATGGCCTATCCTCCATATCATTCTAATCATACCCTTTCTCCAGCTCCTGTATATCCGATGTGGGGACAACCCGGAAGTCAAGCAGGCGGTGTACAGATTTGGGGTCCTCCTGGTTATCCCTTGTGGCAACCTACAGAAAGTTGGCACTGGCAGCCTTATCCGGGGGTTCATGTGGATGCATGGGGTTGCCCAGTGTTGCCACCTCCTCAAGCTCCTTGTTTCTCCTACCCTCAAAATATAGCTGGGTTGCACAATGCTAAAGCAGTGGATTATAGATTTGGCATGCCACGAAGTTCCTTTGAGCATCATCCGGCAGAGGAGGTGGTTGACAAGGTTGTGAAGGAGGCAATTAGCAAGCCATGGCTACCCTTGCCCTTAGGCCTCAAACCTCCTTCAATGGATAGTGTACTGGCTGAACTCTCCAAGGAAGGCATGTCCAGCATCCCTCTTGGCCGCAGCAAGGGTTCCAAGCATACCTGA | 1671 | 0.45 | MVCTANELQGWKDFPKGLRVLLLEGDIISAAEIRAKLEAMDYIVSTFCDENEALSAISSNPEGFHVALVEVSTSSSQGGFKFLENAKGLPTIMTSNSQCLNTMMKCIALGAVEFLTKPVSEDKLKNIWQHVVHKAFNAGASILSESLKPVKESVKSMLQLLTDKGQHESTISIDLENVSRFSDNVHEQSAGSDKYPAPSTPQLKQAARLLDDGDCHEQTNCSTEKESGEHDGESKSAETSCENLNAESSLQPRKPEKTMIKEEEDFANVSKGENAVSLNPHNRKFLSNADGNTSPNKGGVLNESREIKANRKKMKVDWTPELHKKFVKAVEQLGVDQAIPSRILELMKVDGLTRHNVASHLQKYRMHKRQTVPGEEDRKWQNQRDPTQRSYCMQRPIMAYPPYHSNHTLSPAPVYPMWGQPGSQAGGVQIWGPPGYPLWQPTESWHWQPYPGVHVDAWGCPVLPPPQAPCFSYPQNIAGLHNAKAVDYRFGMPRSSFEHHPAEEVVDKVVKEAISKPWLPLPLGLKPPSMDSVLAELSKEGMSSIPLGRSKGSKHT | 556 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4282g00011 | 556 | MobiDBLite | consensus disorder prediction | 238 | 252 | - | - | |
Gabi4282g00011 | 556 | SUPERFAMILY | Homeodomain-like | 312 | 369 | IPR009057 | - | |
Gabi4282g00011 | 556 | FunFam | Two-component response regulator-like APRR2 | 17 | 143 | - | - | |
Gabi4282g00011 | 556 | FunFam | Two-component response regulator | 309 | 371 | - | - | |
Gabi4282g00011 | 556 | Gene3D | - | 18 | 140 | - | - | |
Gabi4282g00011 | 556 | MobiDBLite | consensus disorder prediction | 368 | 384 | - | - | |
Gabi4282g00011 | 556 | SUPERFAMILY | CheY-like | 16 | 134 | IPR011006 | - | |
Gabi4282g00011 | 556 | MobiDBLite | consensus disorder prediction | 281 | 300 | - | - | |
Gabi4282g00011 | 556 | MobiDBLite | consensus disorder prediction | 367 | 387 | - | - | |
Gabi4282g00011 | 556 | MobiDBLite | consensus disorder prediction | 214 | 256 | - | - | |
Gabi4282g00011 | 556 | PANTHER | TRANSCRIPTION ACTIVATOR GLK1 | 1 | 546 | IPR044825 | GO:0003700|GO:0045893 | |
Gabi4282g00011 | 556 | ProSiteProfiles | Response regulatory domain profile. | 19 | 132 | IPR001789 | GO:0000160 | |
Gabi4282g00011 | 556 | Pfam | Myb-like DNA-binding domain | 316 | 365 | IPR001005 | - | |
Gabi4282g00011 | 556 | SMART | REC_2 | 18 | 128 | IPR001789 | GO:0000160 | |
Gabi4282g00011 | 556 | MobiDBLite | consensus disorder prediction | 214 | 237 | - | - | |
Gabi4282g00011 | 556 | MobiDBLite | consensus disorder prediction | 281 | 301 | - | - | |
Gabi4282g00011 | 556 | Gene3D | - | 309 | 370 | - | - | |
Gabi4282g00011 | 556 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 310 | 369 | IPR017930 | - | |
Gabi4282g00011 | 556 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 313 | 368 | IPR006447 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4282g00011 | Gabi-Chr4282 | 82438 | 89860 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4282g00011 | 1 | 546 | Response Regulator Gene Family | AT4G18020 | 49.138 | 3.83e-143 | 422 |