Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4281g00077 ATGGAGAAAGAGGTTGTAGAAAACCTTTGGAACGGTAATAGAGAAATGCAAATTCAAGCCGCTATGGAACTCAGGAAATTAAGCAGAAAACAGAAGCACTATTTGGCTGAAAGTGGAATTATGGTACCTTTAGTTTCTATGCTTCATTCTCAAGACTACGAAGCCATTGAAGCTGCTCTGCATGCTCTACTTAGCCTTGCCTTTGGCAGTGAACGAAACAAGACTCGGATCATCAAGTCTGGAGCATTGCCAGTGTTGCTAAGTCTCCTCTATTGCCAGAGCCAAACAGTGGCAGAATTGTCAATAGCTTCCATGCTAACAATCTCTTCTTGCAATGCTAATAAGATAGCAATTGCTTCATCTGGGGCATTCCCACTCTTAGCTCAATTTCTCAATAGCACTAGCAGCACACAGTCCCAGCTTGACACTGTAGCTACTCTCCACAACCTCTCAACCTGCCAAGAGATTACACCATTGATTGTATCTTCAGGTGTTATCCTTTCCTTGCTTGAACTGATCCAAAGAACAGGAAAATCATCTCAATTGGTTGAGAAAGCAATTGGGTTGCTAGAACATATTGTCTCTTCATCAGAGAGTGCATTATGTGAAGCTGCTAGTATTGTGGGAACAATTCCCACACTGGTGGAGACTATTGAAGATGGATCTTCTCAAAGCAAAGAGCATGCAGTGGGAACACTCCTCCTTATTTGCCAAAGTTGCAGAGAAAAATACAGAGGATTGATCTTGAGAGAGGGAGTGATGCCAGGGCTACTTCAGTTAAGCGTGGATGGAACACGCAGAGCCAAAAATTTAGCTAAGGAATTGTTGCTACTTTTGAGGGATTGTTCAAGTTATAGTAGTTCAAGAAGTCAACAAATTAGCCATGAGCATATAGAACGGATCATGGATGAAATTTATGCAGAAAGAGAGGAACTGGCTGAGACTACGTTGAAGTTGGTAGAGGACATGGTTGCAAAACTTAATACATGA 990 0.4192 MEKEVVENLWNGNREMQIQAAMELRKLSRKQKHYLAESGIMVPLVSMLHSQDYEAIEAALHALLSLAFGSERNKTRIIKSGALPVLLSLLYCQSQTVAELSIASMLTISSCNANKIAIASSGAFPLLAQFLNSTSSTQSQLDTVATLHNLSTCQEITPLIVSSGVILSLLELIQRTGKSSQLVEKAIGLLEHIVSSSESALCEAASIVGTIPTLVETIEDGSSQSKEHAVGTLLLICQSCREKYRGLILREGVMPGLLQLSVDGTRRAKNLAKELLLLLRDCSSYSSSRSQQISHEHIERIMDEIYAEREELAETTLKLVEDMVAKLNT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4281g00077 329 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 164 199 IPR000225 GO:0005515
Gabi4281g00077 329 FunFam U-box domain-containing protein 4 201 318 - -
Gabi4281g00077 329 Pfam Kinesin-associated protein (KAP) 6 169 - -
Gabi4281g00077 329 FunFam U-box domain-containing protein 4 3 197 - -
Gabi4281g00077 329 SUPERFAMILY ARM repeat 4 315 IPR016024 -
Gabi4281g00077 329 Gene3D - 3 328 IPR011989 -
Gabi4281g00077 329 PANTHER U BOX DOMAIN-CONTAINING 4 284 - -
Gabi4281g00077 329 SMART arm_5 197 238 IPR000225 GO:0005515
Gabi4281g00077 329 SMART arm_5 28 68 IPR000225 GO:0005515
Gabi4281g00077 329 SMART arm_5 70 110 IPR000225 GO:0005515
Gabi4281g00077 329 SMART arm_5 111 152 IPR000225 GO:0005515
Gabi4281g00077 329 SMART arm_5 153 195 IPR000225 GO:0005515
Gabi4281g00077 329 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 165 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4281g00077 Gabi-Chr4281 709771 711203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4281g00077 4 281 U-box Gene Family AT3G54790 32.624 8.57e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4281g00077 - - gmx:100811007 458.373