Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4281g00075 ATGGCTGACTTAGCTAATGGCCAAACCGGCTCCGTCAACAAGGTCCCCACCATCAAGTTCACTAAGCTCTTCATTAATGGTGATTTTGTCGATTCCATTTCAGGAAAGACATTTGAGACAATAGATCCAAGAACAGGAGAGGCAATAGCGAGTATTAGCGAGGGAACCAAAGAAGACATAGATATTGCTGTAAAGGCTGCACGTCAAGCATTTGACTCAGGTCCATGGCCTCGCCTGCCCGGCGCTGAGAGAGCGAAAATTATGATGAAATGGGCAGATCTAATTGATCAAAACACAGAAGAACTAGCAGCACTAGATGCCATTGATGCTGGCAAGTTGTATCATATGTGTAAGGTTCTAGACATTCCTGGAGCAGCAAACACCCTACGTTACTATGCAGGTGCTGCTGATAAAATTCATGGAGAGGTATTAAAAATGTCACAGGAGTTCCATGCTTATACATTGATGGAACCAGTTGGCGTTGTGGGGCATATAATTCCCTGGAATTTCCCTTCTTCCATGTTCTTCATCAAGGTTAGCCCTTCTTTAGCTGCAGGGTGCACCATGATCCTCAAACCAGCTGAGCAAACACCTCTCTCTGCTTTGTTCTATGCTCATCTAGCTAAATTGGCTGGAATCCCAGATGGAGTACTCAATGTAGTACCCGGATTTGGCCCAACTGCTGGTGCTGCAATAACCTCACACATGGACATTGATGCAGTCAGCTTTACTGGTTCAACAGAAGTAGGTCGTGAGGTAATGCAAGCTGCAGCTAAGAGTAACTTGAAACATGTTTCACTTGAATTAGGAGGCAAATCACCCCTCATAATTTTTGATGATGCTGATTTAGACAAAGCTGCCGAGCTTGCTCTATTTGGCATCCTGTTTAACAAGGGAGAAGTTTGTGTTGCAAGTTCCCGTGTGTTCGTTCAAGAAGGGATCTATGATGAATTAGAGAAAAAATTGGTAGAGAAAGCGGAAGCTTGGGTTGTTGGGGATCCCTTTGATCCTAAAGTTCAGCAAGGGCCTCAGGTTGACAAGAAACAATTTGAAAAAATTCTTTCATATATCGAACATGGAAAAAGAGAAGGAGCTACCCTTTTGACCGGGGGGAAGACAGTGGGCAACAAGGGCTACTTCATTCAGCCGACAATCTTCTCCAATATAAAGGATGATATGCTTATAGCTCAGGATGAAATATTTGGCCCTGTAATGGCACTGAAGAAGTTTAAGACCATCGAGGAAGCAATTAAGAGTGCTAACAATACCAGATATGGCCTAGCAGCAGGCATTGTGACAAAGAACATAGATACAGCAAACACAGTGTCAAGGTCCATTCGTGCAGGCACTATTTGGATCAACTGCTATTTTGCCTTCGGGGATGATGTTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAAAGATTATGGATTAGAAGCCCTTCACAAGTATCTACAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1506 0.4329 MADLANGQTGSVNKVPTIKFTKLFINGDFVDSISGKTFETIDPRTGEAIASISEGTKEDIDIAVKAARQAFDSGPWPRLPGAERAKIMMKWADLIDQNTEELAALDAIDAGKLYHMCKVLDIPGAANTLRYYAGAADKIHGEVLKMSQEFHAYTLMEPVGVVGHIIPWNFPSSMFFIKVSPSLAAGCTMILKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGPTAGAAITSHMDIDAVSFTGSTEVGREVMQAAAKSNLKHVSLELGGKSPLIIFDDADLDKAAELALFGILFNKGEVCVASSRVFVQEGIYDELEKKLVEKAEAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKTVGNKGYFIQPTIFSNIKDDMLIAQDEIFGPVMALKKFKTIEEAIKSANNTRYGLAAGIVTKNIDTANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDYGLEALHKYLQVKSVVTPIYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4281g00075 501 FunFam Aldehyde dehydrogenase3 271 460 - -
Gabi4281g00075 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 286 - -
Gabi4281g00075 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Gabi4281g00075 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Gabi4281g00075 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 14 491 - -
Gabi4281g00075 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
Gabi4281g00075 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Gabi4281g00075 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Gabi4281g00075 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
Gabi4281g00075 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4281g00075 Gabi-Chr4281 688853 694748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4281g00075 4 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.259 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4281g00075 K12355 - gmx:100811540 897.886