Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4281g00061 ATGGGGATCACCAAACGCAACTCTCTCTCCATTCTTTTCCTATTCATCGCACTCTCTCTCTACCGTTTCCGTTTCCATTTCCAATTCCAAACCCTACCCCCTCCTAATTCCGCCGAACCCCGCCACAACCACAACCACAACCACAACTACAACTACATCGTGCGCTTTCTTGAATACAAGCTCGCCGAGCACCACCGTGCCTACCTGGAATCCAACCTCCGATCCCAAGGCTGGAAGTGGATCGAGCGCCGGAATCCTGCCGCCAACTACCCCACCGATTTCGGGTTAGTTTCGGTTGAGGATTCGGTTAAAGATGGGTTAACCGACGAGATTCGGAATCTTGAACTGGTGAAAGACGTGCATGTGGATATGGGGTATAAGAGGGATCTTCTCAAACACGAATCTTCTTCCTTTGTCGATGTAAAGAAGCGCCCTGGAAAGATATTCACGTCCATGTCGTTTAGCGACTCAGCAAACTACTCTTCGGGGAGGGACCTTTTGATGCAGAGATCTCAAATTACTTCCATGTTTGGAGCGGAGGATCTTTGGGCGAAAGGGTACACTGGTTCTAAAGTCAAAATGGCTATTTTTGATACTGGCATTCGAGCCAATCACCCTCATTTCCGTAACATCAAGGAGCGTACCAATTGGACCAACGAGGATACATTGAATGATAATCTTGGACATGGGACCTTTGTTGCTGGTGTTATCGCTGGTGTAGATGCTGAGTGCCTTGGCTTTGCACCTGATACTGAGATTTATGCATTTCGTGTATTCACTGATGCACAGGTTTCGTACACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCTACCAATATGGATGTGCTAAATTTGAGCATAGGTGGGCCTGATTATTTGGATCTCCCATTTGTTGAGAAGATATGGGAGATAACAGCAAATAACATTATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAACAATCCAGCTGATCAAAGTGATGTCATTGGTGTTGGCGGCATTGACTATAGTGACCATATAGCTTCCTTTTCCTCCCGTGGCATGAGTACCTGGGAGCTTCCTCATGGTTATGGGCGTGTGAAGCCAGATATAGTTGCATATGGACGGGACATAATGGGATCCAAGATTAGTACGGGTTGTAAAAGTTTATCAGGAACTAGTGTTGCAAGTCCTGTAGTTGCTGGTATTGTATGCTTGCTTGTTAGTGTCATCCCTGAACCTGTTCGAAAAGATATCTTGAACCCAGCAAGCATGAAACAAGCATTGGTGGAGGGTGCTGCTAAGCTTGCTGGGCCTAACATGTTTGAGCAGGGTGCTGGCAGAGTTGATTTGTTAGAATCATATGAGATACTTAAGAGTTACAAACCCAGGGCAAGCATCTTCCCCAGTGTCCTTGATTATACAGATTGTCCTTACTCATGGCCCTTTTGTCGTCAACCACTCTATGCAGGTTCTATGCCTGTGATATTTAATGCCACCATTTTGAATGGGATGGGTGTTGTTGGCTATGTTGAAGGTCCACCAACGTGGCAGCCTTGTAGTGAAGAAGGGAATCTTTTAAGCATTCATTTTACATATTCAGAGGTCATCTGGCCTTGGACTGGTTATTTGGCACTTCACATGCAAATCAAGGAAGAAGGAGCTCAATTTTCTGGGAACATTGAAGGTAATGTGACTCTCAGGGTTTTCAGTCCTCCAGTTCAAGGAGAGAAGGACCTTCGAATCAGTATCTGCATGCTTCAATTGAAGTTAAAAGTGGTACCAACACCACCTCGGTCAAAACGAATTTTGTGGGATCAGTTTCATAGTATTAAATACCCACCTGGTTATATTCCAAGAGACTCTTTGGATGTTCGTAATGACATTCTTGACTGGCATGGTGATCATCTGCACACGAATTTTCACATCCTGTTCAACATGCTACGAGATGCTGGTTACTATATTGAAACACTTGGCTCTCCTCTTACATGCTTTGATGCTCGTCAATATGGAACACTTTTGATGGTGGATCTTGAAGATGAATACTTTGCTGAGGAGATTGAAAAACTAAGAGATGATGTTATAAATACTGGATTGGGACTAGTTGTCTTTGCTGAATGGTATAATGTGGATACCATGGTAAAGATGAGATTCTTTGATGACAATACACGGAGCTGGTGGACTCCAGTTACGGGAGGCGCAAATATTCCAGCTCTTAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAAATAAGATCCTGAATGGTGATTTTTCACTTTTAGGGGAGCAGAGTCGATATGCTTCTGGAACAGATATAGTGAGGTTTCCGAGAGGTGGTTACGTACACAGCTTTTCTTTATTGGATAGTTCAGAAAGTGGAGCCACTCAGAATGTGCTGCTTACTTCTGACATGACCAAGGCAGATTCTCCAATTCTTGGTCTTACAGTGATGGGTGAAGGTCGTGTAGCTGTGTATGGGGATTCTAATTGTTTGGACAGTAGCCATATGGTTACTAATTGTTATTGGCTTCTGAAGAAAATACTTGATTTTACTAATGGAGATGTCAGGGATCCTGTGCTTTTCTCTGATTCAGTTAAACGAGATACTCCATTGTATGAAGATGACAATCAATTGCCATCTCGCAGAACTGATGTCAATTTCTCTATATATTCCGCTGTTGCGGGGAAGGAATTGATCTGCAGGACTGACTCAAGGTTTGAAATATGGGGAACTAAGGGCTACAATTTGCAGGTTAGAGGAAGAAACAGAAGATTGCCTGGTTATCCTGTGATTGATTTGGGGAGAGGTTTCAATGCAACCCTTGATACTTCTAAGATAAGGCATCAGGAATTAGCTGTGAGAAATAAGGGTGACTCTCTTGGGAACAGGTACTTGGGCCTGTTCTATGGGGATGAGCTTGATGCACCTATGCTTATTGGTAGTCAGTGGCTTGTTCCTGCTGTAGTTGCAGCAACTGGTATTTTGCTGTTGTGTTTTTGGCGCATTCGCCAAAAGCAACGTAGACGAAGGAAAGGATCAGGCTCTGGTAGATTGGCCAATTTATAG 3075 0.4374 MGITKRNSLSILFLFIALSLYRFRFHFQFQTLPPPNSAEPRHNHNHNHNYNYIVRFLEYKLAEHHRAYLESNLRSQGWKWIERRNPAANYPTDFGLVSVEDSVKDGLTDEIRNLELVKDVHVDMGYKRDLLKHESSSFVDVKKRPGKIFTSMSFSDSANYSSGRDLLMQRSQITSMFGAEDLWAKGYTGSKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISTGCKSLSGTSVASPVVAGIVCLLVSVIPEPVRKDILNPASMKQALVEGAAKLAGPNMFEQGAGRVDLLESYEILKSYKPRASIFPSVLDYTDCPYSWPFCRQPLYAGSMPVIFNATILNGMGVVGYVEGPPTWQPCSEEGNLLSIHFTYSEVIWPWTGYLALHMQIKEEGAQFSGNIEGNVTLRVFSPPVQGEKDLRISICMLQLKLKVVPTPPRSKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHILFNMLRDAGYYIETLGSPLTCFDARQYGTLLMVDLEDEYFAEEIEKLRDDVINTGLGLVVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGNKILNGDFSLLGEQSRYASGTDIVRFPRGGYVHSFSLLDSSESGATQNVLLTSDMTKADSPILGLTVMGEGRVAVYGDSNCLDSSHMVTNCYWLLKKILDFTNGDVRDPVLFSDSVKRDTPLYEDDNQLPSRRTDVNFSIYSAVAGKELICRTDSRFEIWGTKGYNLQVRGRNRRLPGYPVIDLGRGFNATLDTSKIRHQELAVRNKGDSLGNRYLGLFYGDELDAPMLIGSQWLVPAVVAATGILLLCFWRIRQKQRRRRKGSGSGRLANL 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4281g00061 1024 SUPERFAMILY Subtilisin-like 169 452 IPR036852 GO:0004252|GO:0006508
Gabi4281g00061 1024 PANTHER PEPTIDASE S8 42 443 - -
Gabi4281g00061 1024 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Gabi4281g00061 1024 PRINTS Subtilisin serine protease family (S8) signature 189 208 IPR015500 -
Gabi4281g00061 1024 PRINTS Subtilisin serine protease family (S8) signature 392 408 IPR015500 -
Gabi4281g00061 1024 ProSiteProfiles Serine proteases, subtilase domain profile. 170 459 - -
Gabi4281g00061 1024 CDD Peptidases_S8_SKI-1_like 183 439 IPR034185 -
Gabi4281g00061 1024 Gene3D Peptidase S8/S53 domain 167 457 IPR036852 GO:0004252|GO:0006508
Gabi4281g00061 1024 FunFam subtilisin-like protease SBT6.1 161 455 - -
Gabi4281g00061 1024 Pfam Subtilase family 189 440 IPR000209 GO:0006508|GO:0008236
Gabi4281g00061 1024 ProSitePatterns Serine proteases, subtilase family, serine active site. 393 403 IPR023828 -
Gabi4281g00061 1024 ProSitePatterns Serine proteases, subtilase family, histidine active site. 229 239 IPR022398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4281g00061 Gabi-Chr4281 545551 550850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4281g00061 263 1022 Subtilisin-like Serine Gene Family AT5G19660 80.704 0.0 1265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4281g00061 K08653 - qsa:O6P43_007922 1734.54