Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4281g00045 ATGGAGATGGAGCCTCCCCTTCCCACTCACCCCAAGAGCTGGAGCATCCATACCCGATCCGAGATCATATCCAAGTACCAGGTCATGGAGCGGGTCGGGTCGGGAGCTTACGCCGACGTGTACCGTGGGCGTCGCCTCTCCGACGGCCTCACTGTGGCCCTCAAGGAAGTTCACGACTACCAGTCTGCCTTGCGAGAAATCGAGGCCTTGCAGATGCTGCAGGGTTTCCCAAACGTCGTCGTTTTGCACGAGCACTTCTGGCGCGAGGACGAGGACGCCGTCCTCGTATTGGAGTACCTTAGCACCGACTTGGCCACCGTCATCGGCGACGCCGCCAAGGCCAAGGCCCCTCTCCCTCTTGGGGAGATCAAGCGCTGGATGATCCAGATTCTTTGTGGTGTCGACGCGTGTCACCGTAACATGGTCCTTCATCGAGATTTGAAGCCCTCTAATCTCTTGATTTCCGATCACGGTGTCCTCAAGTTGGCGGATTTTGGACAGGCAAGGATACTTATGGAGCCTGAATTTGATGCTATGGAGGAGAACCCACCACTACAACCACAACCATATGAGCATGATGCTTGTAATCAGGAAAGTTCACTCCATCATCCTGAAGCTTTTCCTCGGATAGACAATTTAAGCCAAGCTGGATATGGAAATCAAGAGCAGGGAACCATTTGTCATGAAGAATATTTTAGAGTTTTAGATGAGATGAAAACAAAGAGCTCCGCCGATGACATTGATAAGGATACAAACATACCTGATGGAAATACCTCTTGTCTTGCAACATGCACAACAAGTGATCTAGATAACGATCCTCTGATAACTTCGTTTAGTTATGAAGTGAGGGAGGGTGAAGGTAAGGAACTTGGTTGTCTCACATCATGTGTTGGAACTCGTTGGTTCAGGGCTCCTGAGCTGCTCTATGGATCCACGGACTATGGTTTAGAGGTTGATCTCTGGTCTTTAGGATGTATCTTTGCAGAGCTCTTAACTCTGAAGCCCTTATTTCCTGGAACAGCTGATATTGATCAGCTCAGCATAATTATTAATGTTTTGGGCAACCTTGATGAGAAAGCTTGGCCTGGTTGTTCAAAACTTCCCGATTACGGAATAATCTCGTTTAGTAAGGTAGAAAGACCTACTGGTCTTGAAGCCTGCCTGCCCAACCGCTCCCCTGATGAAGTGTCTCTGGTCAAAAAACTTATTTGTTATGATCCGGCCAGGAGAGCTACAGCGATGGAGCTACTCCATGACAAGTACTTTAACGAAGAACCTCTTCCTGTTCCTGTTTCTGAGCTACGAGTTCCTTTGACCAGAAATGGAGAAGATGAGGATTCCCCTGGTGGGTTGCATGATAACAATGACATGGGTTCTGATTCTGATTTTGATGATTTTGGCCCTGTGAATATTACCAGAACTGGCACCGGTTTCTCCATGCAGTTTCCTTGA 1452 0.4842 MEMEPPLPTHPKSWSIHTRSEIISKYQVMERVGSGAYADVYRGRRLSDGLTVALKEVHDYQSALREIEALQMLQGFPNVVVLHEHFWREDEDAVLVLEYLSTDLATVIGDAAKAKAPLPLGEIKRWMIQILCGVDACHRNMVLHRDLKPSNLLISDHGVLKLADFGQARILMEPEFDAMEENPPLQPQPYEHDACNQESSLHHPEAFPRIDNLSQAGYGNQEQGTICHEEYFRVLDEMKTKSSADDIDKDTNIPDGNTSCLATCTTSDLDNDPLITSFSYEVREGEGKELGCLTSCVGTRWFRAPELLYGSTDYGLEVDLWSLGCIFAELLTLKPLFPGTADIDQLSIIINVLGNLDEKAWPGCSKLPDYGIISFSKVERPTGLEACLPNRSPDEVSLVKKLICYDPARRATAMELLHDKYFNEEPLPVPVSELRVPLTRNGEDEDSPGGLHDNNDMGSDSDFDDFGPVNITRTGTGFSMQFP 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4281g00045 483 ProSiteProfiles Protein kinase domain profile. 26 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4281g00045 483 Pfam Protein kinase domain 289 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4281g00045 483 Pfam Protein kinase domain 26 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4281g00045 483 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Gabi4281g00045 483 SMART serkin_6 26 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4281g00045 483 PANTHER CELL DIVISION PROTEIN KINASE 24 428 - -
Gabi4281g00045 483 FunFam Cyclin-dependent kinase F-1 17 111 - -
Gabi4281g00045 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Gabi4281g00045 483 Gene3D Phosphorylase Kinase; domain 1 17 113 - -
Gabi4281g00045 483 SUPERFAMILY Protein kinase-like (PK-like) 11 434 IPR011009 -
Gabi4281g00045 483 Gene3D Transferase(Phosphotransferase) domain 1 114 429 - -
Gabi4281g00045 483 MobiDBLite consensus disorder prediction 439 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4281g00045 Gabi-Chr4281 447856 451245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4281g00045 13 483 Core Cell Cycle Gene Families AT4G28980 62.683 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Gabi4281g00045 Pkinase 4.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4281g00045 - - ahf:112726382 747.658