Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4281g00041 ATGAATAGAGGTATCCTTCAGAGCTCACCGGTGCAACAAATGATGGCCGGAAACCCTAACAGCTGGTGGAACATCAATAACATGCACCCTCCAGCTTCTCAACAAGCTTCTCCTTCTAACTTTCTAACTCCATATGCTCCCACTTCTTCTCTTCCTTTCCCTTCCTGGCATGATCTCAATCAAGAGCTTCCCGAGTCATGGAGCCAGCTACTCCTGAGTGGACTGGTGTCTGAAGAAGATCATAAGGCAGGTGGTATGTGCCAGGTTGATGAGTCTAAGAAGTTAGAGAAGTGGGAGGAACAAATGCTAAGTCAGGATCCAAATGCTTCTCTTGTTGATGTTAAGCAAGAAAGTTCGATAAACAGCTATGTATATGGGCATGGAAACGAAGAATTTCAGGCACCAAAACCCACTTGGTCTCAAATAGTGCCACCTTCTAATTCTCCAAAATCATGTGTAACAAGTTTCAGCAGTAGCATGTTGGATTTTTCTAACAATAACACCGATGCGAGGCCTCCTCCACCAGATCCATCTTCTGAGTGCAATAGCACTGCAGTTGGTGGGGCATTCAAGAAAGCTAGGGTTCAACAGTCGACAACTCAGTCGAGCTTTAAGGTTAGGAAGGAGAAATTAGGTGACAGAATTACTGCCCTTCATCAACTCGTTTCCCCATTTGGAAAGACTGACACGGCGTCTGTCCTATTAGAATCTATTGGGTATATCAGATTCCTTCAGACTCAAATTGAGGCCCTTAGCTTTCCATACTTGGGCACTGGATCAGGAAACATGAGGCAACAACAATCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAATGAAAACTGTTTGAAGAGGAAAGCAGCTAGTGAGCAGGATTGTGAAGAAGAAGCAAAGAAGGACCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTGTCATGCACGCTGCAAGTTGGAAGTGACAATGGAGCTGACTATTGGGCTCCTACATTTGGTGGTGGATTTCGCTAG 1029 0.4529 MNRGILQSSPVQQMMAGNPNSWWNINNMHPPASQQASPSNFLTPYAPTSSLPFPSWHDLNQELPESWSQLLLSGLVSEEDHKAGGMCQVDESKKLEKWEEQMLSQDPNASLVDVKQESSINSYVYGHGNEEFQAPKPTWSQIVPPSNSPKSCVTSFSSSMLDFSNNNTDARPPPPDPSSECNSTAVGGAFKKARVQQSTTQSSFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGYIRFLQTQIEALSFPYLGTGSGNMRQQQSVQGEKNCIFPEDPGQLLNENCLKRKAASEQDCEEEAKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPTFGGGFR 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4281g00041 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 256 IPR036638 GO:0046983
Gabi4281g00041 342 MobiDBLite consensus disorder prediction 164 184 - -
Gabi4281g00041 342 Gene3D - 197 255 IPR036638 GO:0046983
Gabi4281g00041 342 CDD bHLH_AtbHLH_like 203 252 IPR045239 -
Gabi4281g00041 342 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 63 324 - -
Gabi4281g00041 342 FunFam Transcription factor bHLH123 family 205 268 - -
Gabi4281g00041 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4281g00041 Gabi-Chr4281 416190 419658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4281g00041 1 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.646 6.25e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4281g00041 - - gmx:100785156 577.4