Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4281g00037 ATGACAGAGGTTCCTTCAATGGAAAGCTCTGACAAGTCTACAGAGAGGAACATTGGGTTGAACCTCAAAGCAACGGAACTGAGACTTGGCTTGCCAGGGTCCGAGTCACCAGAGAGAGATGGTGTGGAGGACAAGAATGGGTTCCCAGGCATGCTCAAGAGTTTGGTATCTGGGGCTAAGAGGGGTTTCTCGGACGCCATTGATGGAGGTTCTGGGAAGTGGGTTCTCTCTGGGAATGGTGGATCTGAAGTGGGTTTGTGTAAAGATGGTGGCTTGTTCTCTCCAAGGGGTGTTACTGCTCCCAAGTCTCTCTCTCTTGCCGCGCCTGACTGCACCAACCAGCAAACGGCTTTGGGTGTCTCTGTTGTCAAAGAAAGTGTCCCACACTCTCCAAAGCCATTGCATGAGAAGAAGCCTCAGATTTCTGCTCCCGCTGCAAAGGCGCAAGTTGTAGGATGGCCACCAATCCGTTCTTTCAGGAAGAACTCAATGGCCACTCAGCCTCAAAAGAATGATGCTGATGCTGATGCTGATGCTGAAGCCAAGTCTGAATGCCTTTACGTAAAAGTCAGCATGGAAGGCGCCCCATACTTGAGGAAAGTGGATCTGAATAGTTTTAGCACGTACAGGGAACTTTCTTCAGCACTCGAAAAGATGTTTAGTTGTTTTACAATCAGTCAATGTAGTTCTTATGCGGTTTCTAGTCGAGAAAATTTAAGTGAAAGTAGATTGATGGATCTTCTTCATGGTTCAGAATATGTGCTTACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCCTGGGAGATGTTCACTGACTCTTGCAAGAGGCTGAGGATAATGAAGAGTTCTGAGGCAATTGGGCTAGCACCTAGAGCTATGGAGAAGTGCAAAAGTCGCAACTAG 918 0.4749 MTEVPSMESSDKSTERNIGLNLKATELRLGLPGSESPERDGVEDKNGFPGMLKSLVSGAKRGFSDAIDGGSGKWVLSGNGGSEVGLCKDGGLFSPRGVTAPKSLSLAAPDCTNQQTALGVSVVKESVPHSPKPLHEKKPQISAPAAKAQVVGWPPIRSFRKNSMATQPQKNDADADADAEAKSECLYVKVSMEGAPYLRKVDLNSFSTYRELSSALEKMFSCFTISQCSSYAVSSRENLSESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMKSSEAIGLAPRAMEKCKSRN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4281g00037 305 FunFam Auxin-responsive protein 180 297 - -
Gabi4281g00037 305 SUPERFAMILY CAD & PB1 domains 183 286 - -
Gabi4281g00037 305 MobiDBLite consensus disorder prediction 1 20 - -
Gabi4281g00037 305 MobiDBLite consensus disorder prediction 1 49 - -
Gabi4281g00037 305 ProSiteProfiles PB1 domain profile. 185 287 IPR000270 GO:0005515
Gabi4281g00037 305 Gene3D - 179 299 - -
Gabi4281g00037 305 Pfam AUX/IAA family 25 296 IPR033389 -
Gabi4281g00037 305 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 20 292 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4281g00037 Gabi-Chr4281 354442 357593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4281g00037 189 295 B3 DNA Binding Superfamily AT4G23980 30.841 2.22e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gabi4281g00037 AUX_IAA 4.3e-88 CL0072