Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4281g00027 ATGGTGAGAGTTATTCCCATGGCTTCTTCCATTCGACCCACTCTCTCCTCCTTTAGGTTTTCACCTCGTTCCTCTCTTTCTCTCTTCAACCCTTCTCCCCGACTCTCTTTCTTCCATCTTCCACCTGCAGTCCCACAATCCCATAGTTTTGGCCTGAAAGCATCTAGGCTGTTCAGACAGGATGGTAACTCCATAAGAGTGATGGCATCCCAGGCAAGCACGGCTGCTTCACAAGAAAATGTACTAGAGTGGGTCAAACAGGACAAGCGAAGAATGCTACATGTTGTTTATCGTGTTGGGGACTTGGACAGGACCATAAAATTTTATACAGAGTGCCTGGGAATGAAGCTCCTCAGAAAGCGTGACATACCAGAGGAGAGATACACTAACGCCTTTCTTGGATATGGGCCCGAAGACTCCCACTTTGTTGTTGAACTAACATACAATTATGGAGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCTGTTGATGATATTACGAAAACAGTGGAACTAATAAGAGCTAAAGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGTCGCACAGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCTGAGCCTTTGTGCCAAGTAATGCTTCGAGTGGGTGATCTTAATCGTTCTATAGAATTTTATGAAAAGGCTTTTGGTATGGAGCTGCTGCGTACACGAGATAATCCAGAGTATAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGTACTGTTCTGGAGTTGACTTACAATTATGGAGTTACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTATACAAAACTGCAGAAGCTATTAAACTATCTGGAGGAAAGATTACTCGGGAACCTGGACCATTACCTGGTATCAACACAAAAATTACAGCATGCTTGGATCCTGATGGTTGGAAGTCGGTTTTTGTAGATAATGTTGATTTTCTGAAGGAGTTGGAGTAG 1062 0.4237 MVRVIPMASSIRPTLSSFRFSPRSSLSLFNPSPRLSFFHLPPAVPQSHSFGLKASRLFRQDGNSIRVMASQASTAASQENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGRTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNVDFLKELE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4281g00027 353 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 90 220 IPR029068 -
Gabi4281g00027 353 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 91 215 IPR037523 -
Gabi4281g00027 353 FunFam Lactoylglutathione lyase 88 217 - -
Gabi4281g00027 353 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 222 343 IPR029068 -
Gabi4281g00027 353 ProSitePatterns Glyoxalase I signature 2. 158 170 IPR018146 GO:0004462|GO:0046872
Gabi4281g00027 353 Gene3D - 62 216 IPR029068 -
Gabi4281g00027 353 ProSitePatterns Glyoxalase I signature 1. 94 115 IPR018146 GO:0004462|GO:0046872
Gabi4281g00027 353 ProSitePatterns Glyoxalase I signature 1. 224 245 IPR018146 GO:0004462|GO:0046872
Gabi4281g00027 353 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 224 339 IPR004360 -
Gabi4281g00027 353 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 92 212 IPR004360 -
Gabi4281g00027 353 FunFam Lactoylglutathione lyase 218 353 - -
Gabi4281g00027 353 CDD GlxI_Ni 222 343 - -
Gabi4281g00027 353 NCBIfam lactoylglutathione lyase 91 216 IPR004361 GO:0004462|GO:0046872
Gabi4281g00027 353 CDD GlxI_Ni 92 213 - -
Gabi4281g00027 353 Gene3D - 218 353 IPR029068 -
Gabi4281g00027 353 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 221 345 IPR037523 -
Gabi4281g00027 353 PANTHER LACTOYLGLUTATHIONE LYASE 70 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4281g00027 Gabi-Chr4281 258866 263817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4281g00027 224 342 Calmodulin-binding Proteins AT1G08110 28.276 1.70e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4281g00027 K01759 - gmx:100780463 620.157