Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4281g00026 ATGGTGAGAGTTATTCCCATGGCTTCTTCCATTCGACCCACTCTCTCCTCCTTTAGGTTTTCACCTCGTTCCTCTCTTTCTCTCTTCAACCCTTCTCCCCGACTCTCTTTCTTCCATCTTCCACCTGTCCCACAATCCCATAGTTTTGGCCTGAAAGCATCTAGGCTGTTCAGACAGGATGGTAACTCCATAAGAGTGATGGCATCCCAGGCAAGCACGGCTGCTTCACAAGAAAATGTACTAGAGTGGGTCAAACAGGACAAGCGAAGAATGCTACATGTTGTTTATCGTGTTGGGGACTTGGACAGGACCATAAAATTTTATACAGAGTGCCTGGGAATGAAGCTCCTCAGAAAGCGTGACATACCAGAGGAGAGATACACTAACGCCTTTCTTGGATATGGGCCCGAAGACTCCCACTTTGTTGTTGAACTAACATACAATTATGGAGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCTGTTGATGATATTACGAAAACAGTGGAACTAATAAGAGCTAAAGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGTCGCACAGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCTGAGCCTTTGTGCCAAGTAATGCTTCGAGTGGGTGATCTTAATCGTTCTATAGAATTTTATGAAAAGGCTTTTGGTATGGAGCTGCTGCGTACACGAGATAATCCAGAGTATAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGTACTGTTCTGGAGTTGACTTACAATTATGGAGTTACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTATACAAAACTGCAGAAGCTATTAAACTATCTGGAGGAAAGATTACTCGGGAACCTGGACCATTACCTGGTATCAACACAAAAATTACAGCATGCTTGGATCCTGATGGTTGGAAGTCGGTTTTTGTAGATAATGTTGATTTTCTGAAGGAGTTGGAGTAG 1059 0.423 MVRVIPMASSIRPTLSSFRFSPRSSLSLFNPSPRLSFFHLPPVPQSHSFGLKASRLFRQDGNSIRVMASQASTAASQENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGRTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNVDFLKELE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4281g00026 352 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 220 344 IPR037523 -
Gabi4281g00026 352 FunFam Lactoylglutathione lyase 217 352 - -
Gabi4281g00026 352 CDD GlxI_Ni 91 212 - -
Gabi4281g00026 352 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 91 211 IPR004360 -
Gabi4281g00026 352 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 223 338 IPR004360 -
Gabi4281g00026 352 PANTHER LACTOYLGLUTATHIONE LYASE 69 352 - -
Gabi4281g00026 352 ProSitePatterns Glyoxalase I signature 1. 93 114 IPR018146 GO:0004462|GO:0046872
Gabi4281g00026 352 NCBIfam lactoylglutathione lyase 90 215 IPR004361 GO:0004462|GO:0046872
Gabi4281g00026 352 CDD GlxI_Ni 221 342 - -
Gabi4281g00026 352 FunFam Lactoylglutathione lyase 87 216 - -
Gabi4281g00026 352 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 89 219 IPR029068 -
Gabi4281g00026 352 Gene3D - 217 352 IPR029068 -
Gabi4281g00026 352 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 221 342 IPR029068 -
Gabi4281g00026 352 Gene3D - 61 215 IPR029068 -
Gabi4281g00026 352 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 90 214 IPR037523 -
Gabi4281g00026 352 ProSitePatterns Glyoxalase I signature 1. 223 244 IPR018146 GO:0004462|GO:0046872
Gabi4281g00026 352 ProSitePatterns Glyoxalase I signature 2. 157 169 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4281g00026 Gabi-Chr4281 258865 263817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4281g00026 223 341 Calmodulin-binding Proteins AT1G08110 28.276 1.98e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4281g00026 K01759 - gmx:100780463 616.305