Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi427g00004 ATGAGTTCTCCATGTTCATCAGAGTTCTTGGTCAATTCAAGAAGCATAGTATCATTTCCTTCAAACTCTTCAGCAGGAGAAGACAACATGGCCAGTGATCAAAACAGGCCTCCTCATGCCTCCCCACCTTCATTTTTGACTCGTGTGGCCATGAGAATATCTAGAGCAAGATGGTTCACCTTCTTAAGAAGAGTATTCCATTACCAAAATGGACCAAGATCTAATCTTGGTTCTAACCCTTTCAATTCTAGCACATGGATGATGCTGGAGTTGATTGCTTTGATGGTTCAGGTCACTAGTACAACATTCACTTTGGCCATTTCAAAGAGCGAGAAGCCTATTTGGCCTATGAGGATATGGATAGTAGGTTATGATATTGGTTGTGTCCTTAATCTGTTGCTACTTTATGGCCGCTACCATCAACTTTATGTGACTCAAGGGGATGCTCTTACCCTTTCTGATATGGAACAGCAGAGAAACAATGAAGAAACCAGTGTGTACAGGAGCTCACATTTGATGGATAAATGCCGGAGTTCACTAGAGCTTTTTTTTGCAATATGGTTTGTGATGGGCAATGTTTGGGCTTTTGACTCACGTTTTGGTTCTTTTCAACAAGCTCCAAAACTCCAAGTGCTCTGCATCATCCTCCTTGTTTGGAATGCAATTTGCTACTCTTTCCCTTTTCTACTATTTTTGCTATTGTGCTGTTGTGTGCCACTAATTAGCACCCTCCTTGGATACAACATGAACATGGGTTCCTCTGCTAGAGGTGCTTCTGATGATCAAATTTCACAACTTCCAAGTTGGAGATATAAAGTGCTTCATACCAACAACTTAGACCATGCCAATGACTCAGAAAGCAGTCAAAGATTGATCAATGAAGATCCAGAATGTTGCATTTGCTTAGCCAAGTACAAAGACAAAGAAGAAGTTAGGCAATTGCCCTGTTCCCATATGTTCCATCTAAAATGTGTGGATCAATGGTTAAGAATTATATCTTGCTGCCCTCTTTGCAAACAAGGATTGCAAAGGTAG 1035 0.4087 MSSPCSSEFLVNSRSIVSFPSNSSAGEDNMASDQNRPPHASPPSFLTRVAMRISRARWFTFLRRVFHYQNGPRSNLGSNPFNSSTWMMLELIALMVQVTSTTFTLAISKSEKPIWPMRIWIVGYDIGCVLNLLLLYGRYHQLYVTQGDALTLSDMEQQRNNEETSVYRSSHLMDKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQVLCIILLVWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNMGSSARGASDDQISQLPSWRYKVLHTNNLDHANDSESSQRLINEDPECCICLAKYKDKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCKQGLQR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi427g00004 344 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 15 342 - -
Gabi427g00004 344 Pfam RING-like zinc finger 297 325 IPR001841 -
Gabi427g00004 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 343 IPR013083 -
Gabi427g00004 344 SMART ring_2 298 338 IPR001841 -
Gabi427g00004 344 ProSiteProfiles Zinc finger RING-type profile. 298 339 IPR001841 -
Gabi427g00004 344 MobiDBLite consensus disorder prediction 22 43 - -
Gabi427g00004 344 MobiDBLite consensus disorder prediction 22 41 - -
Gabi427g00004 344 SUPERFAMILY RING/U-box 288 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi427g00004 Gabi-Chr427 7555 10111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi427g00004 37 342 C3H Transcription Factor Family AT4G26580 68.404 3.92e-148 419