Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4276g00005 | ATGGCTTCTGCAAAGAAAGACATGGATCGGATTAAAGGTCCATGGAGCCTCGAAGAGGACGAGGCTTTGAAGAAGCTGGTTCAGACTTACGGGCCTAGAAACTGGTCTCTGATCAGCAAATCAATTCCGGGACGATCCGGGAAGTCATGCCGGTTGCGGTGGTGCAACCAGCTGTCCCCGGAGGTAGAACACAGGCCTTTCACTACGGAGGAAGACGACGCTATCATCAGAGCGCATGCAAGGTTTGGTAACAAGTGGGCCACCATATCTCGCCTTCTCAATGGCCGCACCGACAACGCCATTAAGAACCACTGGAATTCCACCCTCAAGAGGAAATGCTCCGTCATCAACGATGCTCACACTGACCACCAGCCTCTCAAAAGATCCGCCAGTACCGGTGCGGGCACTGTCTCGGGTTTGTACTTGACTCCGAACAGCCCATCCGGATCCGATTTGAGCGATTCAAGTTTACACGTTATGTCTCCGACTCCGACGGAGGTTTTAAGACCGCTTGCGAGGAGTGTAACCCTGTTTCCCTCTCCTTCAACCCATCCTTTGGAAACTGCTTCTTCGGCCCCTGATCCACCCACGTCACTCAGCTTATCTCTGCCCGGATCCGATTCCTGCGGGTCTGGGCTTAACCAGGAGATCCAGCCAGCGCAGAGAAGTCAGGAGGGCGAGAAATTTAGTTACGAGAAGCAGTTGTCCAGCGCGGAGTTCTTGGCGTTGATGCAAGAGATGATTCGAATGGAAGTGACGAATTACATGTCTGGAGTTGAGCATAATGGTTTGTGTATGCAGACCGAAGACATTAGAAACGCTGTGGTCAAGCGTATGAGAATTGGCAGGGTCGAGTAG | 858 | 0.5245 | MASAKKDMDRIKGPWSLEEDEALKKLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFTTEEDDAIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVINDAHTDHQPLKRSASTGAGTVSGLYLTPNSPSGSDLSDSSLHVMSPTPTEVLRPLARSVTLFPSPSTHPLETASSAPDPPTSLSLSLPGSDSCGSGLNQEIQPAQRSQEGEKFSYEKQLSSAEFLALMQEMIRMEVTNYMSGVEHNGLCMQTEDIRNAVVKRMRIGRVE | 285 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4276g00005 | 285 | ProSiteProfiles | Myb-like domain profile. | 7 | 58 | IPR001005 | - | |
Gabi4276g00005 | 285 | SUPERFAMILY | Homeodomain-like | 9 | 105 | IPR009057 | - | |
Gabi4276g00005 | 285 | MobiDBLite | consensus disorder prediction | 178 | 214 | - | - | |
Gabi4276g00005 | 285 | Pfam | Myb-like DNA-binding domain | 66 | 108 | IPR001005 | - | |
Gabi4276g00005 | 285 | Pfam | Myb-like DNA-binding domain | 12 | 58 | IPR001005 | - | |
Gabi4276g00005 | 285 | MobiDBLite | consensus disorder prediction | 124 | 161 | - | - | |
Gabi4276g00005 | 285 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 64 | 113 | IPR017930 | - | |
Gabi4276g00005 | 285 | PANTHER | MYB PROTEIN-RELATED | 12 | 182 | - | - | |
Gabi4276g00005 | 285 | FunFam | Transcription factor MYB44 | 66 | 112 | - | - | |
Gabi4276g00005 | 285 | Gene3D | - | 65 | 132 | - | - | |
Gabi4276g00005 | 285 | CDD | SANT | 14 | 56 | IPR001005 | - | |
Gabi4276g00005 | 285 | MobiDBLite | consensus disorder prediction | 126 | 161 | - | - | |
Gabi4276g00005 | 285 | Gene3D | - | 11 | 63 | - | - | |
Gabi4276g00005 | 285 | FunFam | MYB transcription factor | 12 | 63 | - | - | |
Gabi4276g00005 | 285 | CDD | SANT | 66 | 109 | IPR001005 | - | |
Gabi4276g00005 | 285 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 7 | 62 | IPR017930 | - | |
Gabi4276g00005 | 285 | ProSiteProfiles | Myb-like domain profile. | 59 | 109 | IPR001005 | - | |
Gabi4276g00005 | 285 | SMART | sant | 11 | 60 | IPR001005 | - | |
Gabi4276g00005 | 285 | SMART | sant | 63 | 111 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4276g00005 | Gabi-Chr4276 | 66884 | 68120 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4276g00005 | 5 | 285 | MYB Transcription Factor Family | AT4G37260 | 47.734 | 2.71e-93 | 277 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gabi4276g00005 | Myb_DNA-binding | 1.4e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4276g00005 | K09422 | - | cpap:110818856 | 357.451 |