Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4274g00002 ATGGAGTTGGGTCTCGAGAATATACCCTCCCTTGCAATCTTATCCTTCTTTCTCTTCTTGTTCATGGTGTTAAGCATAGTTTTGAGATCAAAAACCAAGCCTTCAAACTCCAAGTTGCCACCAGGACCCCCCAAACTGCCTCTTATAGGGAACATGCACCAGCTTGGTGCAATGCCTCATCACAGCCTAGCAAAATTAGCACAGAAATATGGGCCTCTTATGCATATGAAACTTGGTGGAATTTCCACCATAGTGGTGTCTTCCCCTCAAATGGCCAAAGAAGTAATGAAGACACATGATATAATCTTTGCAAATAGGCCTCTTATTGTTGCTGCTGATGTTATAACTTATGGTTCTAAGGGCATGAGCTTTTCCTCTTATGGAAGTTATTGGAGACAGATGAGAAAGATTTGCACGTTTGAGCTACTAACTCCAAAGCGTGTTGAGTCATTTCAATCAATTAGGAAAGAGGAGGCATCAAATCTTATTAAAGAGATTAGTTTGAATGAAGGGTCACCCATCAATCTCAGTAAAACGATCAATTCATTAAGCTGTGGCTTAGCATCACGAGTAGCCTTAGGAGGCAAATCTAAAGACCAAGAAGCATTCATTGCTGTTATGAGAGATGTCATGAAAGTAATTGCTGGTTTCTCTATAGCTGACTTGTATCCTTCTATTGAAGTGCTTCAATTTTTGACAGGAATAAGATCCAAAGCTGAGAAGCTCCATCAAGAAATAGATAGGATCTTTGAGAAAATTGTCAGAGATCACAGAGACATGAGTTCAGAAACAAAGGCAATGGATGAAAAAGTAGGTGTTGATCTAGTTGATGTCCTCCTAAAGCTTCAGAAGCAGAACAACCTTGAGCATCCTCTATCTGACAGCATTATCAAAGGAACCATTTTGGATATGTTCGCTGGTGGAAGCGGTACTTCAGCTAAAACCATAGAATGGGCAATATCAGAACTTGTCAAAAACCCAAGGGTGATGGAAAGAACACAGGATGAAATAAGAATGGTCTTTAATGGTAAAGGGCATGTAGATGAAGCTAAACTCCATGAACTGAAATACTTAAAAAAATATGAACCCATAAAAGAAACCTTGCGTCTACATAAGCCTTTTCCTTTATTAATACCAAGGGAAAGCAGTGAGAGATGTGAAATTAATGGGTATGAGATACCAGCTAAGAGTAAAGTCATTGTTAATGCTTGGGAAATTGGGAGGGACCCAAACCACTGGATTGAAGCAGAGAAGTTTAATCCAGAAAGATTCCTTGATAGTTCAGTTGATTACAAAGGTTCAGATTTTCAATTTATCCCATTTGGTGCTGGAAGAAGGATGTGTCCTGGCATTACATTTGGCATTGCTAATGTTGAACTCTTACTAGCAAATTTGCTTTTCCACTTTGATTGGAAGATGCCTAATAGGGATAAGCCTGAAGAACTTGACATGACTGAATCATTTGGCTTGACTGTTAGAAGGAAACATGATTTGTATTTGGTTCCTAGTATGTATCACTCATCTGCTAATTAA 1533 0.3894 MELGLENIPSLAILSFFLFLFMVLSIVLRSKTKPSNSKLPPGPPKLPLIGNMHQLGAMPHHSLAKLAQKYGPLMHMKLGGISTIVVSSPQMAKEVMKTHDIIFANRPLIVAADVITYGSKGMSFSSYGSYWRQMRKICTFELLTPKRVESFQSIRKEEASNLIKEISLNEGSPINLSKTINSLSCGLASRVALGGKSKDQEAFIAVMRDVMKVIAGFSIADLYPSIEVLQFLTGIRSKAEKLHQEIDRIFEKIVRDHRDMSSETKAMDEKVGVDLVDVLLKLQKQNNLEHPLSDSIIKGTILDMFAGGSGTSAKTIEWAISELVKNPRVMERTQDEIRMVFNGKGHVDEAKLHELKYLKKYEPIKETLRLHKPFPLLIPRESSERCEINGYEIPAKSKVIVNAWEIGRDPNHWIEAEKFNPERFLDSSVDYKGSDFQFIPFGAGRRMCPGITFGIANVELLLANLLFHFDWKMPNRDKPEELDMTESFGLTVRRKHDLYLVPSMYHSSAN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4274g00002 510 FunFam Cytochrome P450 71D8 32 502 - -
Gabi4274g00002 510 Pfam Cytochrome P450 40 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 CDD CYP71-like 69 498 - -
Gabi4274g00002 510 Gene3D Cytochrome P450 25 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PANTHER OS08G0105600 PROTEIN 61 505 - -
Gabi4274g00002 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Gabi4274g00002 510 SUPERFAMILY Cytochrome P450 40 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4274g00002 510 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4274g00002 Gabi-Chr4274 17074 19297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4274g00002 11 505 Cytochrome P450 AT3G48280 39.516 1.38e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4274g00002 - - gmx:100818000 771.541