Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi426g00003 ATGGAGAATCAGCCTTCAAATGGAAGAAAGGAAATGGAACAAGAGCTACTCAGAGGGCATGACATAGCAAACCAGTTACTTGAAGTACTTGTTCATAAATCGAATGCTCACCATGGAGATGTAAGAGGGTCAATGTTACCATTTGCTGAAGATCTTGTGCGCAAGGTACTGAGATCATTCACAAACACACTTTTCATCTTGAACACCAATAATGATGTCTCCAATGAGGTGGTTGTTCCTCTCACTGTCAGAGATTTCTCTTCTTCCGCTAATTTCCAAAAGCCTGAGGATACAGATGAGACTCGCGAGAGTTTCTTCAACCCTAAAAGTAGAAGAGGGTGCTACAAGAGAAAGTCAACTGCAACAACTTGGGAGAAGGACAGCGCAAATCTGATTGACGATGGCTGTGCATGGAGAAAGTATGGACAAAAAATGACAATGAATGCCAAATACGTTAGGAGCTACTTCAGATGCACTCACAAGAATGATCAAGGTTGTCCCGCAATCAAACAAGTGCAGAGAATTCAAGAGCACCCTCCATTATATAGGACAACATATTATGGGCATCACAAATGCAAAAGCTCTATAAATTCAGAGATAATTTTGGAACCTAATTCTTCTTCTGGCTCTTCTACATTCCTTAGCTTCAATAACAGCCTTCCAAGCAGAGAAGAACACCCTTTTTCATCATCACTTTTTGCATCCACGAAACATGAGCCTATGGAAGTGATTCCCAATGACCATATTGCTCACAACCAATTGTCTTCGTCAGATTACCTCATGTCATGTGACTATGAACATGATTTGAGTTATTCGAGTCATGTTACTATGCTACCATATACCGAATTTGTTCAATTTGAAAACGTTTATGGGTGCAGCTTGGATTTTGATGTCTAG 897 0.4036 MENQPSNGRKEMEQELLRGHDIANQLLEVLVHKSNAHHGDVRGSMLPFAEDLVRKVLRSFTNTLFILNTNNDVSNEVVVPLTVRDFSSSANFQKPEDTDETRESFFNPKSRRGCYKRKSTATTWEKDSANLIDDGCAWRKYGQKMTMNAKYVRSYFRCTHKNDQGCPAIKQVQRIQEHPPLYRTTYYGHHKCKSSINSEIILEPNSSSGSSTFLSFNNSLPSREEHPFSSSLFASTKHEPMEVIPNDHIAHNQLSSSDYLMSCDYEHDLSYSSHVTMLPYTEFVQFENVYGCSLDFDV 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi426g00003 298 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi426g00003 298 ProSiteProfiles WRKY domain profile. 127 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi426g00003 298 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 214 IPR044810 GO:0003700
Gabi426g00003 298 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi426g00003 298 SUPERFAMILY WRKY DNA-binding domain 128 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi426g00003 298 Gene3D WRKY domain 115 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi426g00003 Gabi-Chr426 109532 111281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi426g00003 1 192 WRKY Transcription Factor Family AT3G56400 39.378 4.71e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi426g00003 WRKY 1.1e-21 CL0274