Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi426g00002 ATGGAGAATCAATCTTCAAATGGCAGAATAGCAATGGAAGAAGAGCTAATAAGAGGGCGTGACATGGCAAACGAGTTACTTGAAGTACTTGCAAACGAGGAAGGGTCAAAGTCAGTGTTACCAATTGCTGAAGATCTTGTTCTCAATGTACTGAGATCATTCACAAATACCCTTTTGCTCTTGAACACCAATAATGATCACTCCGATGAGGTGGTGGTGCCTATTCCTATCAGAGATATCTGTTCCTCCGCAAACGGCACAAAGCCAGAGGATCTGAATGAAACTAGCAAGAGTTTCATCACAAAAAATCGAAGATGGTGCTACAAAAGAAAATCAGTTGCACCAACTTGGGAGAAGGAGAGCTCAATTCTGATTGAAGATGGCTATGTATGGAGAAAGTATGGACAAAAAATGACAATGAATGCCAAATACCTCAGGAGCTACTACAGGTGCACTTACAAGAATGAACAGAATTGCCAAGCAATCAAACAAGTGCAAAGAATTCAAGAGGACCCTCCATTGTACCGGACAACATATTATGGTCATCACACTTGTGAAAGCTCTCTTAACCATGAGATAATATTGGAATCTGCTTCATCTTCTGCCTCTTCTGGATTTCTATGCTTCAATAGTACCCTAACAAAAAGCAAAGAAGAACAACCGGTTTCATCATCAGTTTTTTCATCAACAAAACAGAAGTCTACGGAAGTGATTGCAGATGACCAAATTGATCACAACCAATTGTCCTCACCAGATTACATTCACCTGTTATGTGACTATGAACTTGATTTCAATTATACGAGGTATGTCACAATGATATCATCCACCGGTTCTGTTGAATTTCACAATGTTTAA 855 0.3942 MENQSSNGRIAMEEELIRGRDMANELLEVLANEEGSKSVLPIAEDLVLNVLRSFTNTLLLLNTNNDHSDEVVVPIPIRDICSSANGTKPEDLNETSKSFITKNRRWCYKRKSVAPTWEKESSILIEDGYVWRKYGQKMTMNAKYLRSYYRCTYKNEQNCQAIKQVQRIQEDPPLYRTTYYGHHTCESSLNHEIILESASSSASSGFLCFNSTLTKSKEEQPVSSSVFSSTKQKSTEVIADDQIDHNQLSSPDYIHLLCDYELDFNYTRYVTMISSTGSVEFHNV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi426g00002 284 Pfam WRKY DNA -binding domain 126 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi426g00002 284 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 210 IPR044810 GO:0003700
Gabi426g00002 284 SUPERFAMILY WRKY DNA-binding domain 123 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi426g00002 284 ProSiteProfiles WRKY domain profile. 120 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi426g00002 284 SMART WRKY_cls 125 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi426g00002 284 Gene3D WRKY domain 103 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi426g00002 Gabi-Chr426 71606 73463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi426g00002 9 185 WRKY Transcription Factor Family AT3G56400 38.547 2.26e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi426g00002 WRKY 5.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi426g00002 - - gmx:102663141 322.398