Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi426g00001 ATGGATCAGAATCAGCTTTCAAATGGAAGAAAGGCAATGGAACAGGAGCTACTCAGAGGGCGTGATATAGCAAATCAGTTACTTGAAGTACTTGTTCATAAATCGAATGCTCACCATGGAGATGTAAGAGGGTCAATGTTACCATTTGCTGAAGATCTTGTGCGCAAGGTACTGAGATCATTCACAAACACCCTTTTCATCTTGAAAACCAATAATGATGTCTCCAATGAGGTGGTTGTTCCTATCACTGTCAGGGATTTCTCTTCTTCCGCTAATTGCCAAAAGCCTGAGGATACAGATGAGACTCGCGAGAGTTTCTTCAACCCTAAAAGTAGAAGAGGGTGCTACAAGAGAAAGTCAACTGCACCAACTTGGGAGAGGGACAGCTCAAATCTGATTGAAGATGGCTATGCCTGGAGAAAGTATGGACAAAAAATGACAATGAATGCTAAATATCTTAGGAGCTACTTCAGATGCACTCACAAGAATGATCAAGGCTGTCCAGCAATCAAGCAGGAACAGAGAATTCAAGAGGACCCTCCATTGTATCGGACAACATATTACGGCCATCACATATGCAAAAGCTCTTTAACTTCAGAGATAATTTTGGAACCTAATTCTTCTTCTGGCTCTTCTATATTCCTTAACTTCAATAACAGCCTTCCAAGCAAAGAAGAATACCCTTTTTCATCATCACTTTTTGCATCCACAAAACATGAGCCTATGGAAGTGATTCCCAATGACCATTTTGCTCACAACCAATTGCCCTCATCAGATTACCCCATGTCATGTGACTATGAACTTGATTTGAGTTATTCAAGTCTTGTTACTATGCTACCATATACCGAATCTGTTCAATTTGATCAAAACGCTTATGGGTGTAGTTTGGATTTTGATGGCTAG 903 0.4042 MDQNQLSNGRKAMEQELLRGRDIANQLLEVLVHKSNAHHGDVRGSMLPFAEDLVRKVLRSFTNTLFILKTNNDVSNEVVVPITVRDFSSSANCQKPEDTDETRESFFNPKSRRGCYKRKSTAPTWERDSSNLIEDGYAWRKYGQKMTMNAKYLRSYFRCTHKNDQGCPAIKQEQRIQEDPPLYRTTYYGHHICKSSLTSEIILEPNSSSGSSIFLNFNNSLPSKEEYPFSSSLFASTKHEPMEVIPNDHFAHNQLPSSDYPMSCDYELDLSYSSLVTMLPYTESVQFDQNAYGCSLDFDG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi426g00001 300 Gene3D WRKY domain 118 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi426g00001 300 ProSiteProfiles WRKY domain profile. 128 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi426g00001 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 218 IPR044810 GO:0003700
Gabi426g00001 300 Pfam WRKY DNA -binding domain 134 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi426g00001 300 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi426g00001 300 SUPERFAMILY WRKY DNA-binding domain 129 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi426g00001 Gabi-Chr426 43770 45515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi426g00001 1 195 WRKY Transcription Factor Family AT3G56400 39.394 5.51e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi426g00001 WRKY 2.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi426g00001 - - gmx:102663141 390.193