Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4265g00006 ATGACCATCATTTTCTTTTCAGATATCTCCCCTTCACAGGTCAAGTTCTATGTAACTGAGGCCTCACTCATGCAGTTCAACCTCACCAACAACACCACCTTATATTACAACTTCAAGGTCAACATCACAGTGAGAAACCCCAACAAACACATCATAGTGTACTACAGAGTGATCAGAGCAATTGCTTGGTATAAAGATAATGACTTTGCTTATGTGAGCTTGACACCCTTTGACCAAGGCCACAAGAACACTAGCTTCCTTCAGCCTGTAGTGTTTGAAGGACACACTCTGATTAATCTCACAACTTGCCAACTTGGTGAGTATATTGAGGAGACACGTGCTGGGATTTACAACTTGGCTGTAAATTTGGATCTTACAATGAGAATGAAGTTTGGATGGTACAAGAGGAGTCGTTTTAATCCACCAATTGTGCAGTGTTCTTTGATAGTTCCTTTGATTTCCAATGGTAAATCAGCAACTCCTTTCAATTTCTCTAGTTCTAAGATGTTCTATTTTTGCATGAATAGCCACCCTGATTGGTAA 543 0.3996 MTIIFFSDISPSQVKFYVTEASLMQFNLTNNTTLYYNFKVNITVRNPNKHIIVYYRVIRAIAWYKDNDFAYVSLTPFDQGHKNTSFLQPVVFEGHTLINLTTCQLGEYIEETRAGIYNLAVNLDLTMRMKFGWYKRSRFNPPIVQCSLIVPLISNGKSATPFNFSSSKMFYFCMNSHPDW 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4265g00006 180 Pfam Late embryogenesis abundant protein 41 133 IPR004864 -
Gabi4265g00006 180 PANTHER OS05G0367900 PROTEIN 3 157 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4265g00006 Gabi-Chr4265 56916 57836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4265g00006 9 160 SNARE and Associated Proteins AT1G32270 28.205 2.81e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4265g00006 - - gmx:100783747 208.379