Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4265g00002 ATGTGTTGCAAATTCCGCTGCAGCTTCTGCTGCATCTGTTTGACAATCTTTGCTTTTATTTTCATGATCATACTTTTTATGATCATCTTCTTCACAATCATCTCACCCACAAACCTCAAGTTCTATGTAACTGAGGCCTCTCTCACACAGTTCAACCTCACCAACAACAACAACTTATATTACAACTTCAAAGTAAACATCACAGTGAGAAACCCCAACAAGAAGGTCATAGTGGATTATAGAGGGATCACAGCAATTGCTTGGTACAAAGATAATGACTTTGCTTATTTGAGTTTGGCACCCTTTGACCAAGGCCAAAAGAACACTAGCTTCCTTCAAGTGCAGTTTGAAGGAAATAGTGTGTGTAGTCTCAAACCTAAACAACTAGGTGAGTATAATGAGGAGACACGTGTTGGGATTTACAATGACTTGGATGTGGATTTGGATTTTCGAATTAGATTCAATTATGTTGGAAGGTACAAAAGTAGTCGTTTCAATCCACCTATTGTTCAGTGTCGTCGTTTGAGAGTTCCTTTGATTTCAAATGGTACATTAGAATCTCCTTTCAGTGTTACAAAATGCAGCACCCCTTATTTCTTTGTAGATCGTGATTCAGGAGATTAA 624 0.3814 MCCKFRCSFCCICLTIFAFIFMIILFMIIFFTIISPTNLKFYVTEASLTQFNLTNNNNLYYNFKVNITVRNPNKKVIVDYRGITAIAWYKDNDFAYLSLAPFDQGQKNTSFLQVQFEGNSVCSLKPKQLGEYNEETRVGIYNDLDVDLDFRIRFNYVGRYKSSRFNPPIVQCRRLRVPLISNGTLESPFSVTKCSTPYFFVDRDSGD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4265g00002 207 PANTHER OS05G0367900 PROTEIN 7 178 IPR044839 GO:0098542
Gabi4265g00002 207 Pfam Late embryogenesis abundant protein 66 156 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4265g00002 Gabi-Chr4265 41517 42140 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4265g00002 33 179 SNARE and Associated Proteins AT1G32270 27.703 3.13e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4265g00002 - - gmx:100784278 249.595