Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4256g00004 ATGGATTCATCTAACTCCCAGGGAGTGGTTGCACAACTATCAAGGCGGGTTCAGACTCGCAAGGCTAGCCGCGAGAACTCTTTAAGGGGAAAGCTTCTAACTTCCCTTGGAACACATGAGATTTTCAGCTCAGAGACATGGAAAGCAGCTTTCACAGAGTTAGTGGCAACTGCTCTTATGTTGTTCACAATGACAACTTCCATAATTGCATGCTTGGACTCACATGAGACCGATCCTAAGCTTCTTGTTCCCTTTGCAGTATTCATCATACTCTTCTTGTTCCTACTTGTGACAGTTCCTCTATCTGGGGGTCATATGGGCCCTGTTATCACATGCATAGCTGCTCTAAAGGGTGTTGTGACTCTTACTCGTGCTCTCATGTACATGTTAGCACAATGCATCGGCTCAATACTTGGTTTCTTTTTACTTAAGTGTGTGATGGATCCAAGGTTAGTAGATACATATTCCTTGGGAGGCTGTGCCATTGGAGGAATAAATTCTGGTTTACCACAGCAACAAGCATTGTTATTGGAATTCACTTGCTCATTTGTGCTACTCTTTGTGGGTATCACATTGGGATTTGACAAGAAAAGGTCAAAGGAAATGGGCTTGCCAATGGTATGCTTTGTGATAGCAGCATCCTTGGCACTAGCAATATTTGTGTCAATGACTGTAACTGGGCGTCCTGGTTATGCAGGTGTGGGCCTTAACCCAGCAAGATGCTTAGGCCCAGCATTGCTTCATAGAGGCTCGCTGTGGAATGGGCATTGGGTTTTCTGGGTTGGGCCCTTCTTGGCCTGCATAATATATTATGGTGTCACTCTCAACTTTCCAAAAGAGGGTTTTAATTGGGTAGATGGGGAATATGATGTCTTAAAGTTGGCTAGGAGTTCTTGCGTGCCTGTTTCTAAAACTGATATTAGAGTAGAAGGCAGTGCAGAGTTTGAAGTCCATGTATGA 960 0.4427 MDSSNSQGVVAQLSRRVQTRKASRENSLRGKLLTSLGTHEIFSSETWKAAFTELVATALMLFTMTTSIIACLDSHETDPKLLVPFAVFIILFLFLLVTVPLSGGHMGPVITCIAALKGVVTLTRALMYMLAQCIGSILGFFLLKCVMDPRLVDTYSLGGCAIGGINSGLPQQQALLLEFTCSFVLLFVGITLGFDKKRSKEMGLPMVCFVIAASLALAIFVSMTVTGRPGYAGVGLNPARCLGPALLHRGSLWNGHWVFWVGPFLACIIYYGVTLNFPKEGFNWVDGEYDVLKLARSSCVPVSKTDIRVEGSAEFEVHV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4256g00004 319 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4256g00004 319 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4256g00004 319 PRINTS Major intrinsic protein family signature 48 67 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4256g00004 319 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4256g00004 319 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4256g00004 319 PRINTS Major intrinsic protein family signature 177 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4256g00004 319 MobiDBLite consensus disorder prediction 1 17 - -
Gabi4256g00004 319 Pfam Major intrinsic protein 43 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4256g00004 319 MobiDBLite consensus disorder prediction 1 22 - -
Gabi4256g00004 319 SUPERFAMILY Aquaporin-like 46 270 IPR023271 -
Gabi4256g00004 319 Gene3D Glycerol uptake facilitator protein. 7 280 IPR023271 -
Gabi4256g00004 319 PANTHER AQUAPORIN-LIKE 17 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4256g00004 Gabi-Chr4256 18162 21444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4256g00004 47 269 Major Intrinsic Protein MIP AT3G54820 29.787 4.11e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4256g00004 K09866 - gmx:100804160 424.861