Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4255g00004 ATGGGTGTATCCCACAAATGGTTGAGACTTGTTCGTAGGAAGTTCCTCAGATCATCCAACAAAGACATAATTCTCCCACGAACAAGTATTTGCACGAATCAAAGTGAAGAAGCCATACTAAGGAATGATGCAACCACCACCGAAGACTTCGATTTGCCGATACCAACCTCTTCGGCTAACATATTCACCGAGGAAGATGTCGCAGCAACTAAGATCCAAGCTTATTTCAGGGGTCATCTTGCAAGACAAGCATTTCGGGCTCTTAAAAGCCTGGTGAAGCTGCAAGCATTGGTTCGTGGGGTGTGCGTAAGGAAACAATCACGTATAGCAATGCAGTGTATGCACGTTCTTGTCCGGTTACAAGTCAGGGTTCGTGCAAGGCAGCTACTTGGCAGGTTTGATAATGATTAA 411 0.4526 MGVSHKWLRLVRRKFLRSSNKDIILPRTSICTNQSEEAILRNDATTTEDFDLPIPTSSANIFTEEDVAATKIQAYFRGHLARQAFRALKSLVKLQALVRGVCVRKQSRIAMQCMHVLVRLQVRVRARQLLGRFDND 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4255g00004 136 ProSiteProfiles IQ motif profile. 65 93 IPR000048 GO:0005515
Gabi4255g00004 136 SMART iq_5 64 86 IPR000048 GO:0005515
Gabi4255g00004 136 SMART iq_5 87 108 IPR000048 GO:0005515
Gabi4255g00004 136 Pfam IQ calmodulin-binding motif 68 86 IPR000048 GO:0005515
Gabi4255g00004 136 Gene3D - 64 115 - -
Gabi4255g00004 136 ProSiteProfiles IQ motif profile. 89 115 IPR000048 GO:0005515
Gabi4255g00004 136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 109 IPR027417 -
Gabi4255g00004 136 PANTHER IQ-DOMAIN 5-RELATED 13 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4255g00004 Gabi-Chr4255 59543 60475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4255g00004 1 131 IQD Protein Family AT3G51380 51.145 1.30e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4255g00004 - - cam:101507643 176.407