Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4252g00006 ATGGATCAGGTAAGACTACGTGAGAGGAGTTCTTATGGAATGATTGGCAATGAGAAATTAGTATGTCAATATATTGAAAGCTCCAAAACAAGGGGTGTTTGGCTTGGAGATAACCCCCTCAATCACAGCACAACTGTCCTATTACTTCAGATTATTGTTATGTTCACTGTTGGTAGAATTACTCATCTCTTGCTAAGGCCTTGTCATCAAACTCAGATCATTGCACAGATTGTGGCTGGTGTCATATTGGGTCCTTTATTTCTAGGTCGACATGATGCATGTTTTGAGATGATATTTCCATCAGCAAGCAGACTGACACTTACAACATTTGCTGAATTTGGCATGGTAATTCACTTCTTTAAGATGGGGGTACAGATCAATCCCACACAGATCTTGAAGATAGAAAAAAAGGCAGTGGTAATTGGTCTAGGTGGTCATTTGTCTGCCATAGCAATTGGAACTGCAGTTTTAAATATTGTAGACAAAATGTACCCACTGGGGTCTGAAAAGGAAGGTATATATGGTTTGGTTGTGTGTAGTGCTCTAACAGCATTTCCTGTTACAAGTGGCTTCCTCAATGAGATGAACATTCTCAATTCAGAGATTGGACGTGTGGCTTTATCCACTTCCATGATTAGTGATGCATGTATGTGGGTAAATTATTTTGTTATCGTCAATACTACTAAAGCATTGCAACAAGGGTCATGTAGACCTATTTTGGAATTGACTTTGTCACTTTGCTATATATCCATCTTATTCTTCCTGCTAAGGCCACTTGTTATATGGATCTCCCACCGAAATCCAAAGGGAAAGCCCATAACAGAAAGCCATTTCATGTCAATTATTTCGATACTTCTGTTTATTTCATTCTCTGCACAAGTTTGTGGCCAACCTGCTTTCCTTGTTGCTTTTTGGTTTGGCTTGATCTTGCCGGATGGTCCCCCTTTAGGTTCTGTTCTGGCAGAAAAGCTTGATACTGTTGGTTCTACTTTGATTGTTCCAGCTTTCTGTACTATTATTGGGATCAGGACAAATGTTCCTCCATTAACAGGATCAAAGACAGCAAGCTTAGAGATTATTTTGATTGCAGGGTATATGGGCAAGTTTTTAGGCACCCTTTTACCCTCACTTCACTTTCAGATTGACTTCTGGGATTCTTTGGCATTGGCTCTAATCATGTGTTGCAAAGGCCTTGTAGATATCAGTGTGTTCAACATATTATTTAACTCTAAGGACATAGGCGAGGTGAGTTTCTCCCTTGCTATATATACTATGGTGGCAGTAACTGGTTTTTCCTCTCTAGTTGTTTATTACATATATGATCCTTCAAGGAGGTACAGAGCCTATAATAGAAGATCAATTAGGGAATCCAATCAAGACCTTGATCTCAAAGTACTTGTCTGCGTCCACAATGAAGAAAATGTATATCCAATCATCAACCTTCTTCAAGCCTCCAACCCCATTAAGGCTACACCACTCTCAGTCTTTGTTCTACATCTAATGGAGCTTTCAGGCAGGGCATTTTCCATCCTTACCAAAAATGAGGACACTAACAAATCACATTCTTATAAGGAGAGTTCCTCTCAACACATAAGCAATGCCTTTGATCAATTTCAGCTGCATAACAAAGAGGGTGTCAAGTTGCAGTTCTTCACTGTAATTGCACCATATGCAAGCATGCATGATGACATATGCTACATGGCAATGGACACGAAATCTGACATGGTGATTGTGCCATTCCATAAGCAATGGTCCATACATGGAAATTTTGAGGTTCCCATTGCTTCAGTTAGGACACTAAACCAGAAAGTTCTAAGGAAAGCTCCTTGCTCAGTTGGAGTTTTTATTGACAGAAGCGAAATGAGTGGCAAACTATTAGTTATCTATGAGAAATTATATTGTGACATTGCAATGATCTTTGTAGGTGGTGGTGATGATCAAGAAGCATTAGCTTATAGTCTACGCATAGCTCAGCATCCAAACGTAAGACTTACAGTGTTTTGGTTAAGGGTTAAAATGCAAGGTAAACAAAGGAATATGAAGAACCCTTACATTGATTTGATGGAGCATATAAGGTATAGTAATAAGCATAATAACCAACAAATAACCTTCAAGGAGGAGAGTGTGGAAGATGGAGCAGGAACAACACAAGTTATCAGAAAAATGGAGGGAAATTTTAGTATGGTCATAGTAGGTAGACATCATATGCCAGATTCTCCATGTACACTAGGCTTGACAGAATGGTGTGAACTCCCTGAGCTTGGACCAATTGGGAACCTTCTAGCTACATCAGATTTTACATTTTCAGTTTTGGTGGTGCAACAACAAAGCTTTTATAACTTCCGATGTATGAGGTGA 2358 0.3927 MDQVRLRERSSYGMIGNEKLVCQYIESSKTRGVWLGDNPLNHSTTVLLLQIIVMFTVGRITHLLLRPCHQTQIIAQIVAGVILGPLFLGRHDACFEMIFPSASRLTLTTFAEFGMVIHFFKMGVQINPTQILKIEKKAVVIGLGGHLSAIAIGTAVLNIVDKMYPLGSEKEGIYGLVVCSALTAFPVTSGFLNEMNILNSEIGRVALSTSMISDACMWVNYFVIVNTTKALQQGSCRPILELTLSLCYISILFFLLRPLVIWISHRNPKGKPITESHFMSIISILLFISFSAQVCGQPAFLVAFWFGLILPDGPPLGSVLAEKLDTVGSTLIVPAFCTIIGIRTNVPPLTGSKTASLEIILIAGYMGKFLGTLLPSLHFQIDFWDSLALALIMCCKGLVDISVFNILFNSKDIGEVSFSLAIYTMVAVTGFSSLVVYYIYDPSRRYRAYNRRSIRESNQDLDLKVLVCVHNEENVYPIINLLQASNPIKATPLSVFVLHLMELSGRAFSILTKNEDTNKSHSYKESSSQHISNAFDQFQLHNKEGVKLQFFTVIAPYASMHDDICYMAMDTKSDMVIVPFHKQWSIHGNFEVPIASVRTLNQKVLRKAPCSVGVFIDRSEMSGKLLVIYEKLYCDIAMIFVGGGDDQEALAYSLRIAQHPNVRLTVFWLRVKMQGKQRNMKNPYIDLMEHIRYSNKHNNQQITFKEESVEDGAGTTQVIRKMEGNFSMVIVGRHHMPDSPCTLGLTEWCELPELGPIGNLLATSDFTFSVLVVQQQSFYNFRCMR 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4252g00006 785 Gene3D - 44 448 IPR038770 -
Gabi4252g00006 785 PANTHER CATION/H + ANTIPORTER 22 777 - -
Gabi4252g00006 785 Pfam Sodium/hydrogen exchanger family 51 429 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4252g00006 Gabi-Chr4252 65866 69195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4252g00006 18 776 Antiporter Super Family AT1G06970 38.120 1.64e-180 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4252g00006 K26731 - gmx:100804488 1133.63