Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4248g00062 ATGGGTGGTGGAGGAACACTCGCGGATGGCATTCGTCGCCTCTTCCATCGTCGAACTTCTATTAACTCTAACGTTGTTAATGACAACAACATTAATACTGGTGTTGGAAGCAATGCCAACAACGTTAACGATACCAACGTTAAAGAAGAAGAAAACAATAACAACAACAACGACGTCCTCGTGACAGATTCACGCGCCCATTTGGACACAGTTCCCACACACGAAACCGATCAACGCTTTCTTGATAACTCTTCATTGAAGCTTCTCAAAGTGCCTTCACGCTTCCACTTCAATACTTCTTCCATGGATCGTAACAAAAAGGGCGCCTCAGAGACAGAGTTTTTTACTGAGTATGGAGAGGCAAATCGGTACGAGATCCAAGAAGTGGTTGGCAAAGGAAGTTATGGTGTTGTAGGTTCTGCCATAGACACTCATACTGGGGAAAAGGTTGCAATTAAGAAAATCAATGATGTTTTTGAGCATGTATCTGATGCCACGCGAATCCTAAGAGAAATTAAACTCCTTCGTTTGATCCGACATCCCGATATAGTAGAAATTAAGCATATAATGCTTCCTCCCTCACGGAGAGAGTTCAGGGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGACCTTCATCAAGTTATTAAGGCAAATGATGATCTTACACCTGAGCATTACCAATTTTTTTTGTACCAACTTCTTCGGGGCCTGAAATATATACATTCAGCAAATGTGTTTCATCGTGACTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAACTAAAAATATGTGATTTTGGGCTTGCTCGGGTTTCCTTTAATGAGGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTATCGTGCACCGGAACTATGTGGTTCTTTTTTCTCAAAGTATACCCCCGCAATTGATGTTTGGAGCATTGGATGCATATTTGCAGAAATGCTCAGCGGGAAGCCAGTGTTTCCTGGGAAAAATGTGGTACACCAATTGGATCTCATGACTGATTTGCTTGGTACTCCTCCTGCTGAATCCATTTCGAAGATTCGAAATGAGAAGGCTAGACGTTACCTTAGTAGCATGCGGAAAAAGCAACCAGTTCCATTCTCTAAAAAATTTCCAAATGTAGATCCGTTGGCTCTTCATTTACTGGAAAGATTACTTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCATTATCTGATCCTTACTTCCATGGTTTGTCCAATGTGGACCGTGAACCAACCACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGAAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCCCAGATGCTCGAAGAATATCTTCGTGGTGGAGACCAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGTTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGCACTCCACTGCTGAGACAGCATGCCTCCTTACCTAGAGAGCGAGTTTCTACTCCCAAGGATGAAAATGATCAAAACAATGATGAAAAGCCTACTGGATCAAATCTTCAGAGTCCTCCAGGGTCTAATGTGATGGATTCTGGAAACTCGGATGCACAAAATGGAATCTCCAAGCCGAACTACAGCTCGCGTAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCCAAATGTATAGATGTGAAACAAAGTAAAAATCCAGAGGAGGAGCCAATTACCGAAGTTAATGATGAGATATTGGACGAGTTGACAGAGAAGATTTCTACCCTCCATGCATAA 1836 0.4216 MGGGGTLADGIRRLFHRRTSINSNVVNDNNINTGVGSNANNVNDTNVKEEENNNNNNDVLVTDSRAHLDTVPTHETDQRFLDNSSLKLLKVPSRFHFNTSSMDRNKKGASETEFFTEYGEANRYEIQEVVGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLIRHPDIVEIKHIMLPPSRREFRDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDVWSIGCIFAEMLSGKPVFPGKNVVHQLDLMTDLLGTPPAESISKIRNEKARRYLSSMRKKQPVPFSKKFPNVDPLALHLLERLLAFDPKDRPTAEEALSDPYFHGLSNVDREPTTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLEEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLLRQHASLPRERVSTPKDENDQNNDEKPTGSNLQSPPGSNVMDSGNSDAQNGISKPNYSSRSLLKSASISGSKCIDVKQSKNPEEEPITEVNDEILDELTEKISTLHA 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4248g00062 611 SUPERFAMILY Protein kinase-like (PK-like) 118 420 IPR011009 -
Gabi4248g00062 611 ProSiteProfiles Protein kinase domain profile. 124 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4248g00062 611 MobiDBLite consensus disorder prediction 32 57 - -
Gabi4248g00062 611 FunFam Mitogen-activated protein kinase 113 218 - -
Gabi4248g00062 611 ProSitePatterns Protein kinases ATP-binding region signature. 130 154 IPR017441 GO:0005524
Gabi4248g00062 611 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 118 467 - -
Gabi4248g00062 611 Gene3D Transferase(Phosphotransferase) domain 1 210 438 - -
Gabi4248g00062 611 MobiDBLite consensus disorder prediction 513 528 - -
Gabi4248g00062 611 SMART serkin_6 124 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4248g00062 611 MobiDBLite consensus disorder prediction 574 596 - -
Gabi4248g00062 611 MobiDBLite consensus disorder prediction 529 562 - -
Gabi4248g00062 611 FunFam Mitogen-activated protein kinase 210 438 - -
Gabi4248g00062 611 MobiDBLite consensus disorder prediction 495 562 - -
Gabi4248g00062 611 ProSitePatterns MAP kinase signature. 159 262 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gabi4248g00062 611 CDD STKc_TDY_MAPK 123 460 - -
Gabi4248g00062 611 Pfam Protein kinase domain 124 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4248g00062 611 FunFam Mitogen-activated protein kinase 439 461 - -
Gabi4248g00062 611 Gene3D Phosphorylase Kinase; domain 1 140 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4248g00062 Gabi-Chr4248 783293 789574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4248g00062 1 610 MAP Kinase Gene Family AT1G73670 68.659 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gabi4248g00062 Pkinase 3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4248g00062 - - gmx:100776784 942.569