Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4248g00061 ATGGAAAAAAATCAATTATCAAAGGGCGCCTCAGAGACAGAGTTTTTTACTGAGTATGGAGAGGCAAATCGGTACGAGATCCAAGAAGTGGTTGGCAAAGGAAGTTATGGTGTTGTAGGTTCTGCCATAGACACTCATACTGGGGAAAAGGTTGCAATTAAGAAAATCAATGATGTTTTTGAGCATGTATCTGATGCCACGCGAATCCTAAGAGAAATTAAACTCCTTCGTTTGATCCGACATCCCGATATAGTAGAAATTAAGCATATAATGCTTCCTCCCTCACGGAGAGAGTTCAGGGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGACCTTCATCAAGTTATTAAGGCAAATGATGATCTTACACCTGAGCATTACCAATTTTTTTTGTACCAACTTCTTCGGGGCCTGAAATATATACATTCAGCAAATGTGTTTCATCGTGACTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAACTAAAAATATGTGATTTTGGGCTTGCTCGGGTTTCCTTTAATGAGGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTATCGTGCACCGGAACTATGTGGTTCTTTTTTCTCAAAGTATACCCCCGCAATTGATGTTTGGAGCATTGGATGCATATTTGCAGAAATGCTCAGCGGGAAGCCAGTGTTTCCTGGGAAAAATGTGGTACACCAATTGGATCTCATGACTGATTTGCTTGGTACTCCTCCTGCTGAATCCATTTCGAAGATTCGAAATGAGAAGGCTAGACGTTACCTTAGTAGCATGCGGAAAAAGCAACCAGTTCCATTCTCTAAAAAATTTCCAAATGTAGATCCGTTGGCTCTTCATTTACTGGAAAGATTACTTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCATTATCTGATCCTTACTTCCATGGTTTGTCCAATGTGGACCGTGAACCAACCACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGAAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCCCAGATGCTCGAAGAATATCTTCGTGGTGGAGACCAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGTTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGCACTCCACTGCTGAGACAGCATGCCTCCTTACCTAGGTAA 1245 0.4129 MEKNQLSKGASETEFFTEYGEANRYEIQEVVGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLIRHPDIVEIKHIMLPPSRREFRDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDVWSIGCIFAEMLSGKPVFPGKNVVHQLDLMTDLLGTPPAESISKIRNEKARRYLSSMRKKQPVPFSKKFPNVDPLALHLLERLLAFDPKDRPTAEEALSDPYFHGLSNVDREPTTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLEEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLLRQHASLPR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4248g00061 414 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4248g00061 414 SUPERFAMILY Protein kinase-like (PK-like) 19 321 IPR011009 -
Gabi4248g00061 414 FunFam Mitogen-activated protein kinase 340 362 - -
Gabi4248g00061 414 FunFam Mitogen-activated protein kinase 111 339 - -
Gabi4248g00061 414 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gabi4248g00061 414 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4248g00061 414 FunFam Mitogen-activated protein kinase 14 119 - -
Gabi4248g00061 414 Gene3D Phosphorylase Kinase; domain 1 41 362 - -
Gabi4248g00061 414 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gabi4248g00061 414 CDD STKc_TDY_MAPK 24 361 - -
Gabi4248g00061 414 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 368 - -
Gabi4248g00061 414 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4248g00061 414 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4248g00061 Gabi-Chr4248 780758 788369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4248g00061 1 414 MAP Kinase Gene Family AT1G73670 86.715 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gabi4248g00061 Pkinase 1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4248g00061 - - tcc:18604309 775.778