Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4248g00058 ATGAAGAGCATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGAAAATGAACAAGGGTCTTCTCCATCAAAGGGAAACAACTCCAATCATGGTTCATCTTCATCCTCTAAGAAGCTTTTGAACTTTCGTTCCTCTCAAAGTTCTGAGCATAAACCCTTTTCGGGGCTCTCAGGTTGGTTGCATTCAGTTGCTAATAAGCAAAGTCCTAGTCCTCCATCTTTGAACCAAGCAAAAGGAGTGAGAATGGAGCCATCTGAAACGGTGAACAGTGGGGGTTTGGATGTTGTTTCAGATTCAGCTAGGCATGATTCAGAGTCTAGTGCTTCGAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAACTGGCTTTAAAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGGTCTTGTGACCCTGATAATTCACCAGCTGAAGTTGTGGCCTACCGTTATTGGAATTACAATTCTCTTGGTTATGACGACAAGATCATGGATGGTTTTTATGATCTGTATGGGATCTTGACTGAGTCAACCTCTGCAAGAATGCCTTCCCTCGTAGATCTACAAGGAACACCAATTTCAGGTAGTGTCACATGGGAAGCTGTCTTGGTCAATAGGGCTGCTGATTCTAATTTGTTGAAACTTGAGCAAAAAGCCCTAGAGCTGACTGTCAAATCAAGACCTGATTTTGAAGTAGTTATAGATAACGATGTGGTGCACAAGCTTGCAATACTTGTGGCTGACTATATGGGTGGACGAGTTGGAGATCCTAAAAGCATGACAAGAGCATGGAGGAGTCTTAGTGACAGTCTGAAAGCAACACTTGGTAGCATGGTTTTGCCCCTTGGTTCTCTAACTATTGGATTGGCTCGGCATCGTGCGTTGTTATTTAAGGTTCTAGCTGATAGTTTGGGCATCCCATGTCGATTGGTAAAAGGACTGCAATATACAGGTTCTGATGAAGTGGCAATAAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTGATGGCAGATCCTGGAACTCTTATTCCATCTGATGCAACTGATTCACATACCGAGTATGATGACTCTATTTTTGTGGCCAGTCCTTTATCAAGAGACCTTGATTCCTCTCGTGTAGCATCATCCAGCAGTGGGGTTGGAAGTTCATTTGAAGAAACTTCAGATTTTGGGATATTAGACAAAGGGAACAGATCAAAACATTATTCCTATGCAGGGAAAGAATCCGATGTAAGCAGGCCCACCACAGGAAAGGAAGAATCAATAAGACACTTGAATGAATTCAAAACTAATCATCCACATTTGCATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTACGTAGAATGAAAGTCAATGATGTTTCCCTATATATGATTGATGCTGCCAAGGAGAACCCTCACTTAGCTCAGAAACTTCATGATGTTTTTCTCGAAAGCGGTGTTGTTGCTCCTCCAAATTTATTTTCTGAAATTTATCATGAGGAGGTAGGTTCCCCAACTGAGGCCCACTTCCCAACTGAAGAAAAAGATGAACATAAACAGGGAAGTGGACGGCAAGAAACTGAGGTTGATGATAATCTTGGTCCTGCTCAATTTTTGCCTCCTTTGCCCCACTACAGAGTTCATCCCAAAGCAAGTTCTAGCAGTCAGCTGGAGCATTTTAAGCCTGTAGAAGGTTTAGGAATCAACCTTCCTCTTTATAGAAGGGAAGCAGCTGGACAGCATGTACCAACTCAGATTAAATATGGGCAAAATGTCCCGGTTGCTGCTGCAGCAGCGGCTGCTGCCGCCGTTGTCGCATCTTCTATGGTAGTTGCTGTGGCAAAGTCAAGCACTGACTCAAACATTGACCTTCCAGTAGCGGCAGCTGCTACTGCTGCAGCTGTAGTAGCCACCAGTGCTGCTGTCAGTAAACAATACGAGCAGGGAAGTCGAAGTGATGGAGATTCAGACAATGCTGGCTATGAGCCGAAGGGTAGTGATGATGGAGAGCATATTGCTTTAGGCGCAAATTCAGAAGGCGAGAGAATATCTGATAGATCAATAGTAAGTAATGATAGCACAAAATCTGATTCTGCATTAGATGATGTTGCCGAGTATGACATTCCGTGGGAGGAAATCACGCTGGGTGAGCGTATTGGACTTGGATCATATGGGGAAGTGTACCGAGGTGAATGGTGTGGAACTGAAGTTGCTGTAAAGAGGTTTCTTGATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTCAAAATAATGAAAAGATTGAGGCATCCAAATGTCGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATTCACCGACCAAACAGTCAAATAGACGAGCGAAGACGTTTGAGGATGGCACTCGATACTGCTCGAGGAATGAACTATTTGCACAAGTGTACTCCAGTGATCGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAATTGGGTTGTAAAGGTATGTGATTTTGGCTTATCGAGAATGAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCCGAGTGGATGGCTCCAGAGGTGTTGAGGAATGAACCTTCAAATGAAAAGTGTGACGTTTATAGCTTTGGGGTCATATTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGAGGAATGAATCCAATGCAGGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGTCTTGACATCCCAGACGATGTGGACCCTGCCATTGCTGATATTATCAGGAAATGCTGGCAGACAGATCCAAAGTTGAGACCTACATTTGCTGAAATATTGGCGGCTCTGAAGCCATTACAGAAGCCAATAATTGGTTCTCAAGTGCCTCGACCAAGTGCACCCGGTAAGCATGAGAAGGCTCAGTCATCACGTGTGGCAGAAGACTCAGCAAGATAG 3048 0.4386 MKSILKKLHIMSNQSENEQGSSPSKGNNSNHGSSSSSKKLLNFRSSQSSEHKPFSGLSGWLHSVANKQSPSPPSLNQAKGVRMEPSETVNSGGLDVVSDSARHDSESSASRDPEVEEEYQIQLALKLSAKEDPEAVQIEAVKQISLGSCDPDNSPAEVVAYRYWNYNSLGYDDKIMDGFYDLYGILTESTSARMPSLVDLQGTPISGSVTWEAVLVNRAADSNLLKLEQKALELTVKSRPDFEVVIDNDVVHKLAILVADYMGGRVGDPKSMTRAWRSLSDSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYTGSDEVAINFVKIDDGREYIVDLMADPGTLIPSDATDSHTEYDDSIFVASPLSRDLDSSRVASSSSGVGSSFEETSDFGILDKGNRSKHYSYAGKESDVSRPTTGKEESIRHLNEFKTNHPHLHARSPSWTEGISSPAVRRMKVNDVSLYMIDAAKENPHLAQKLHDVFLESGVVAPPNLFSEIYHEEVGSPTEAHFPTEEKDEHKQGSGRQETEVDDNLGPAQFLPPLPHYRVHPKASSSSQLEHFKPVEGLGINLPLYRREAAGQHVPTQIKYGQNVPVAAAAAAAAAVVASSMVVAVAKSSTDSNIDLPVAAAATAAAVVATSAAVSKQYEQGSRSDGDSDNAGYEPKGSDDGEHIALGANSEGERISDRSIVSNDSTKSDSALDDVAEYDIPWEEITLGERIGLGSYGEVYRGEWCGTEVAVKRFLDQDISGESLEEFKSEVKIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNSQIDERRRLRMALDTARGMNYLHKCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPAIADIIRKCWQTDPKLRPTFAEILAALKPLQKPIIGSQVPRPSAPGKHEKAQSSRVAEDSAR 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4248g00058 1015 ProSitePatterns Protein kinases ATP-binding region signature. 734 755 IPR017441 GO:0005524
Gabi4248g00058 1015 MobiDBLite consensus disorder prediction 518 541 - -
Gabi4248g00058 1015 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 92 985 - -
Gabi4248g00058 1015 SMART serkin_6 728 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4248g00058 1015 MobiDBLite consensus disorder prediction 99 117 - -
Gabi4248g00058 1015 FunFam Serine/threonine-protein kinase CTR1 807 990 - -
Gabi4248g00058 1015 ProSiteProfiles Protein kinase domain profile. 728 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4248g00058 1015 FunFam Serine/threonine-protein kinase isoform 1 719 806 - -
Gabi4248g00058 1015 PRINTS Tyrosine kinase catalytic domain signature 888 898 IPR001245 GO:0004672|GO:0006468
Gabi4248g00058 1015 PRINTS Tyrosine kinase catalytic domain signature 802 815 IPR001245 GO:0004672|GO:0006468
Gabi4248g00058 1015 PRINTS Tyrosine kinase catalytic domain signature 907 929 IPR001245 GO:0004672|GO:0006468
Gabi4248g00058 1015 PRINTS Tyrosine kinase catalytic domain signature 841 859 IPR001245 GO:0004672|GO:0006468
Gabi4248g00058 1015 PRINTS Tyrosine kinase catalytic domain signature 951 973 IPR001245 GO:0004672|GO:0006468
Gabi4248g00058 1015 MobiDBLite consensus disorder prediction 61 84 - -
Gabi4248g00058 1015 CDD STKc_MAP3K-like 734 980 - -
Gabi4248g00058 1015 Gene3D Phosphorylase Kinase; domain 1 721 805 - -
Gabi4248g00058 1015 MobiDBLite consensus disorder prediction 518 549 - -
Gabi4248g00058 1015 Pfam Protein tyrosine and serine/threonine kinase 728 979 IPR001245 GO:0004672|GO:0006468
Gabi4248g00058 1015 MobiDBLite consensus disorder prediction 1 117 - -
Gabi4248g00058 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Gabi4248g00058 1015 Gene3D Transferase(Phosphotransferase) domain 1 807 989 - -
Gabi4248g00058 1015 Pfam Ethylene-responsive protein kinase Le-CTR1 156 359 - -
Gabi4248g00058 1015 SUPERFAMILY Protein kinase-like (PK-like) 711 979 IPR011009 -
Gabi4248g00058 1015 MobiDBLite consensus disorder prediction 8 54 - -
Gabi4248g00058 1015 MobiDBLite consensus disorder prediction 659 711 - -
Gabi4248g00058 1015 MobiDBLite consensus disorder prediction 988 1015 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4248g00058 Gabi-Chr4248 757602 777477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4248g00058 1 1003 MAP Kinase Kinase Kinase AT1G73660 61.240 0.0 1158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gabi4248g00058 PK_Tyr_Ser-Thr 8.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4248g00058 - - gmx:100816332 1597.02