Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4240g00079 ATGGCGGGGAAAGTGGCGAAGGCAGCTTACGATGCGAAGATGGGGAAGCTCCTGAGAGAGTACAATCAGGTGGTGGTGGTTGCATCAGATAATGTGGGGTCGAACCAGCTTCAAGGGATACGAAGGGGGCTTCACGCTGACTCGGTGGTTGTGATGGGGAAGAACTCTATGATGAAGCGCTCAATCATGTTGAATGCTCAGAAGACCGGCAACAAGGCCTTCCTTAACCTTGTTCCCCTTCTTGTGGGGAACGTGGCGTTGATTTTCACAAAAGGTGACATGAGGGAGGTTAGCGAACAGATTGTCAAGCACAAGGTTGTTCATCCTATTCTCATGTGCCCCAAGTTCTTGTCGTATGACACATACCACAATTGTTCCTTTTTGCAATCAGGACAATTACCTTTGGGCCTCACTTGTTGTAAGCAGCAGTCTTCCCAGGCTTCTGAGCCTTTTCTTGTATCCTCAAAATTCTTGCCGCACCAACATTGTTACTTAATGAGATCAAGACAGTTCTTGTTGACTAGTTTATGGGCTCCTTTTCTCCTTTTGGCTAGTAACTTGTGA 564 0.4716 MAGKVAKAAYDAKMGKLLREYNQVVVVASDNVGSNQLQGIRRGLHADSVVVMGKNSMMKRSIMLNAQKTGNKAFLNLVPLLVGNVALIFTKGDMREVSEQIVKHKVVHPILMCPKFLSYDTYHNCSFLQSGQLPLGLTCCKQQSSQASEPFLVSSKFLPHQHCYLMRSRQFLLTSLWAPFLLLASNL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4240g00079 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 5 135 - -
Gabi4240g00079 187 Pfam Ribosomal protein L10 6 103 IPR001790 -
Gabi4240g00079 187 SUPERFAMILY Ribosomal protein L10-like 7 105 IPR043141 -
Gabi4240g00079 187 Gene3D - 3 132 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4240g00079 Gabi-Chr4240 700970 702389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4240g00079 1 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 62.832 1.64e-43 145