Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4240g00077 ATGGCGGTGAAACCTACAAAGGCTGAGAAGAAGATCGCTTACGATTCGAAGCTATGCCAGCTTCTGGATATGTATTCACAGATCCTGGTCCGCTCTGTTCGGATTCACGCTGAAAAAACAGGAAACAACGCATTTCTCAACCTGATTCCCCTTCTTGTCGGCAACGTGGGATTGATTTTCACAAAAGGTGACTTGAAGGAGGTTAGCGAAGAGGTTGCCAAGTACAAGGTGGGAGCTCCTGCCCGTGTTGGTCTGGTTGCTCCAATTGATGTTGTTGTTCCTCCTGGCAACACAGGGCTTGATCCCTCGCAGACCTCTTTCTTCCAGGTGCTCAATATTCCAACCAAGATTAACAAGGGTACTGTTGAAATCATTACCCCTGTTGAACTGATTAAGAAAGGAGACAAGGTCGGCTCTTCTGAAGCTGCATTGCTTGCCAAACTCGGTATTAGGCCTTTCTCATATGGGCTTGTTGTACTATCCGTGTATGATAATGGTTCAGTCTTTAGCCCTGATGTCCTCGACCTTACTGAGGATGACCTCATGGAGAAGTTTGCTATTGGTGTCTCAATGGTTACATCTTTGTCATTGGCCGTTGGATACCCAACTCTTGCAGCCGCACCACACATGTTTGTGAATGCCTACAAGAACGTTCTTGCTGTTGCAGTTGCGACAGAATATTCTTTCCCCCAGGCAGACGAGGTTAAGGAGTTCTTAAAGGACCCGAGTAAATTTGCTGTAGCTGCTGTTGCAGCACCTGCTGCAGCTGCTGCTGCTGCCCCAGCTGCTGCTGCTGCCAAGGAAGAGGAAAAGAAGGACGAGCCAGCTGAAGAATCTGATGATGACATGGGTTTCGGTTTGTTTGACTAA 870 0.4782 MAVKPTKAEKKIAYDSKLCQLLDMYSQILVRSVRIHAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPDVLDLTEDDLMEKFAIGVSMVTSLSLAVGYPTLAAAPHMFVNAYKNVLAVAVATEYSFPQADEVKEFLKDPSKFAVAAVAAPAAAAAAAPAAAAAKEEEKKDEPAEESDDDMGFGLFD 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4240g00077 289 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 29 271 - -
Gabi4240g00077 289 Pfam 60s Acidic ribosomal protein 201 288 - -
Gabi4240g00077 289 Pfam Insertion domain in 60S ribosomal protein L10P 81 150 IPR040637 -
Gabi4240g00077 289 MobiDBLite consensus disorder prediction 274 289 - -
Gabi4240g00077 289 Gene3D - 29 176 IPR043141 -
Gabi4240g00077 289 FunFam 60S acidic ribosomal protein P0 80 153 - -
Gabi4240g00077 289 Gene3D - 81 152 IPR043164 -
Gabi4240g00077 289 MobiDBLite consensus disorder prediction 263 289 - -
Gabi4240g00077 289 PIRSF L10E 31 289 IPR030670 GO:0042254
Gabi4240g00077 289 PIRSF L10E 1 35 IPR030670 GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4240g00077 Gabi-Chr4240 693659 696450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4240g00077 1 288 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 75.389 7.85e-159 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4240g00077 K02941 - vvi:100250067 456.832