Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4240g00065 ATGCCTTCTTCTGCGCCCAACATGCTCTCAAAATGCACCATCTTCCCAGACCAAAAATCCAGTATGGGAAACCTCAAACTCTCAGTTTCAGACCTCCCCATGCTCTCCTGCCACTACATTCAAAAGGGGTGCCTCTTCACTGAACCTTCTCTCCCAATCCACACTCTCATCCCCCTCCTCAAGTCCGCACTCTCTCGAACTCTCTCTCTCTTCCCACCTCTCGCTGGTCGCCTCCACACTGATTCCCAAGGTTACGTCTACATCACCTGCAACGATGCTGGCGTCGATTTCGTCCACGCCATTGCCACCGGAATCTATATCCGCGACCTCTTATCCCCACCCGATGTCTCCCAATCCTTCAAGGAATTCTTCCTCTTCGACAGGAAAGTTAGTTACAGCGGCCACTCCTCCCCCCTTTTGGCCGTTCAGGTCACTGAGCTCCCCGACGGCTTCTTTATTGGCTGCGCCGTTAATCACGCCGTCACCGACGGAACCTCCTTCTGGAATTTCTTCAACACCTTCGCCCAAGTCTGCAGAGGAGCTAATAACTGCATCCGAAATGTCCCGGACTTTCGCCGCGACTGCATCCTGATCTCGAAAGCCGTGCTCCGGTTGCCGGAGGGTGGTCCGAAGGTGACATTCAACGCCGACGCGCCGCTGCGCGAGAGGATTTTTAGCTTCAGCCGCGAAGCCATTCAGAGGCTGAAGACCAGAGCCAATAACCGGCGGTTGACGGAGGCTTACGACGCTTCCGAGTTGATGCATAAGCAAAGCAACGATCATCGTCACCAGAAGGAGAACGGCAAGGTCGCCACGATCCTCGAGAACTGGTTCAAGAGCTCCGCCGTTAATTCGAAACCGCAAACGGCTACGGCAGGCGAAACGGTTGAGATTTCGTCGTTTCAGTCGGTGTGCGCGTTGCTCTGGCGCGCGGTGACGCGCGCGAGGAAATTTCCAGCGTCGAAAACGACGACGTTCAGAATGGCTGTTAACTGTCGTCACCGGATAGAGCCGAAATTGGAAGCGTACTACTTCGGGAACGCGATTCAGAGCGTGCCGACGTTTGCTTCTGCAGGCGAAGTGCTGTCTCAGGATCTGCGATGGTGCGCGGAGCAGCTGAACAAGAGCGTGAAGGCGCACGACGAAGCTATGGTGCGGCGATTCGTAGAGGATTGGGAGAGTAACCCGAGGTGCTTCCCGCTTGGGAACCCCGACGGTGCATCGATCACCATGGGTAGCTCTCCGAGATTCCCAATGTACGACAATGATTTAGGGTGGGGACGGCCCTTGGCGGTGAGGAGTGGAAGGGCCAACAAATTTGACGGCAAGATATCGGCGTTTCCTGGCAGAGATGGCAGCGGCACCGTTGATTTGGAGGTTGTTTTGGCGCCAGAAACCATGGCAGGGCTGGAGTCTGATCCCGAGTTCATGCTATACGCTTCGAGTCAGTTATGA 1455 0.5546 MPSSAPNMLSKCTIFPDQKSSMGNLKLSVSDLPMLSCHYIQKGCLFTEPSLPIHTLIPLLKSALSRTLSLFPPLAGRLHTDSQGYVYITCNDAGVDFVHAIATGIYIRDLLSPPDVSQSFKEFFLFDRKVSYSGHSSPLLAVQVTELPDGFFIGCAVNHAVTDGTSFWNFFNTFAQVCRGANNCIRNVPDFRRDCILISKAVLRLPEGGPKVTFNADAPLRERIFSFSREAIQRLKTRANNRRLTEAYDASELMHKQSNDHRHQKENGKVATILENWFKSSAVNSKPQTATAGETVEISSFQSVCALLWRAVTRARKFPASKTTTFRMAVNCRHRIEPKLEAYYFGNAIQSVPTFASAGEVLSQDLRWCAEQLNKSVKAHDEAMVRRFVEDWESNPRCFPLGNPDGASITMGSSPRFPMYDNDLGWGRPLAVRSGRANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLESDPEFMLYASSQL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4240g00065 484 Gene3D - 219 475 IPR023213 -
Gabi4240g00065 484 SUPERFAMILY CoA-dependent acyltransferases 37 180 - -
Gabi4240g00065 484 Gene3D - 7 204 IPR023213 -
Gabi4240g00065 484 Pfam Transferase family 9 477 - -
Gabi4240g00065 484 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4240g00065 Gabi-Chr4240 608302 609756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4240g00065 7 471 Monolignol Biosynthesis Gene Families AT5G48930 26.611 1.67e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4240g00065 - - gmx:100779616 803.127